RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 TDRD3Q9H7E2 651 aaKnown RBP9.26□□□□□ -0.93
SFPQ-202ENST00000460428 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
SFPQ-202ENST00000460428 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
SFPQ-202ENST00000460428 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
SFPQ-202ENST00000460428 CEP131Q9UPN4 1083 aa9.26□□□□□ -0.93
SFPQ-202ENST00000460428 ATF5Q9Y2D1 282 aaPredicted RBP9.26□□□□□ -0.93
SFPQ-202ENST00000460428 SRPRBQ9Y5M8 271 aaKnown RBP9.26□□□□□ -0.93
SFPQ-202ENST00000460428 ARFGEF1Q9Y6D6 1849 aa9.26□□□□□ -0.93
SFPQ-202ENST00000460428 STXBP3O00186 592 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 CCDC192P0DO97 292 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 VEGFAP15692 232 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 RBM5P52756 815 aaKnown RBP eCLIP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 TNIP1Q15025 636 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 DLGAP5Q15398 846 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 CERKLQ49MI3 558 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 GPATCH4Q5T3I0 446 aaKnown RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 CIAPIN1Q6FI81 312 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 SHC4Q6S5L8 630 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 TMEM179Q6ZVK1 233 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 SIAH1Q8IUQ4 282 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 FSIP1Q8NA03 581 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 CCDC12Q8WUD4 166 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 DPF2Q92785 391 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
SFPQ-202ENST00000460428 ZNF70Q9UC06 446 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 FBXO2Q9UK22 296 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
SFPQ-202ENST00000460428 CNTNAP1P78357 1384 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 TRIM75PA6NK02 468 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 USP17L5A8MUK1 530 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 FZD9O00144 591 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 KINO60870 393 aaKnown RBP9.24□□□□□ -0.93
SFPQ-202ENST00000460428 RAD17O75943 681 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 NDUFA8P51970 172 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 NLRP5P59047 1200 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 CCDC173Q0VFZ6 552 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 ORC2Q13416 577 aaPredicted RBP9.24□□□□□ -0.93
SFPQ-202ENST00000460428 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
SFPQ-202ENST00000460428 EARS2Q5JPH6 523 aaKnown RBP9.24□□□□□ -0.93
SFPQ-202ENST00000460428 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 TYW1BQ6NUM6 668 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 TEX2Q8IWB9 1127 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 BLIDQ8IZY5 108 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 KRI1Q8N9T8 703 aaKnown RBP9.24□□□□□ -0.93
SFPQ-202ENST00000460428 GMCL1P1Q8NEA9 526 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 DCAF4Q8WV16 495 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 JDP2Q8WYK2 163 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 TMOD2Q9NZR1 351 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 PCDHB6Q9Y5E3 794 aa9.24□□□□□ -0.93
SFPQ-202ENST00000460428 A0A1B0GVL5 298 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 hCG_1642624A0A1W2PR95 340 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 ZNF202O95125 648 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 PFKFB1P16118 471 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 GNA11P29992 359 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 CACNB3P54284 484 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 ATP2C1P98194 919 aaPredicted RBP9.23□□□□□ -0.93
SFPQ-202ENST00000460428 TYRO3Q06418 890 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 TCP10Q12799 353 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 ARL6IP4Q66PJ3 421 aaKnown RBP9.23□□□□□ -0.93
SFPQ-202ENST00000460428 FERMT2Q96AC1 680 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 RRP36Q96EU6 259 aaKnown RBP9.23□□□□□ -0.93
SFPQ-202ENST00000460428 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 PANK2Q9BZ23 570 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 CLIP2Q9UDT6 1046 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 MRVI1Q9Y6F6 885 aa9.23□□□□□ -0.93
SFPQ-202ENST00000460428 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 WNT10BO00744 389 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 EEF2P13639 858 aaKnown RBP9.22□□□□□ -0.93
SFPQ-202ENST00000460428 MARCKSP29966 332 aaPredicted RBP9.22□□□□□ -0.93
SFPQ-202ENST00000460428 CAMK4Q16566 473 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 ABCB5Q2M3G0 1257 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 HS1BP3Q53T59 392 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
SFPQ-202ENST00000460428 BTNL9Q6UXG8 535 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 C4orf32Q8N8J7 132 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 JMJD4Q9H9V9 463 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 C6orf50Q9HD87 102 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 GINM1Q9NU53 330 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 TUBE1Q9UJT0 475 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 ZBTB12Q9Y330 459 aaPredicted RBP9.22□□□□□ -0.93
SFPQ-202ENST00000460428 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
SFPQ-202ENST00000460428 MYH4Q9Y623 1939 aa9.21□□□□□ -0.93
SFPQ-202ENST00000460428 FAM205CA6NFA0 338 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 LAD1O00515 517 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 MYO1BO43795 1136 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 PLA2G6O60733 806 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 GOLGA8HP0CJ92 632 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 SYKP43405 635 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 PRELPP51888 382 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 RRP1BQ14684 758 aaKnown RBP9.21□□□□□ -0.94
SFPQ-202ENST00000460428 TTC38Q5R3I4 469 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 SASS6Q6UVJ0 657 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
SFPQ-202ENST00000460428 ZSCAN29Q8IWY8 852 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms