RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PLIN4Q96Q06 1357 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 TSPY2A6NKD2 308 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 H0YGN5 161 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 HSPD1P10809 573 aaKnown RBP20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 PCP11498 1178 aaKnown RBP20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 PTPREP23469 700 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 MAP2K5Q13163 448 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 VPS53Q5VIR6 699 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 TRIB2Q92519 343 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 MKL1Q969V6 931 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 SPATC1LQ9H0A9 340 aa20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.77■□□□□ 0.92not detected■□□□□ 9
SCARNA2-201ENST00000458748 HMX1Q9NP08 348 aaPredicted RBP20.77■□□□□ 0.92
SCARNA2-201ENST00000458748 F5H6K3 240 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 STRNO43815 780 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 FGAP02671 866 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 ZKSCAN1P17029 563 aaPredicted RBP20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 KLRC3Q07444 240 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 MAP3K21Q5TCX8 1036 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 CWC27Q6UX04 472 aaKnown RBP20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 UBE2Q1Q7Z7E8 422 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 DPF3Q92784 378 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 DEFB118Q96PH6 123 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 CRISPLD2Q9H0B8 497 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 ADAMTS5Q9UNA0 930 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 ZNF236Q9UL36 1845 aa20.76■□□□□ 0.91
SCARNA2-201ENST00000458748 FOXP2O15409 715 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 ORC4O43929 436 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 RANBP6O60518 1105 aaKnown RBP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 FARP2O94887 1054 aaPredicted RBP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 TFRCP02786 760 aaKnown RBP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 HOXC6P09630 235 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 NT5C2P49902 561 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 GRB14Q14449 540 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 PLS1Q14651 629 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 FAM83BQ5T0W9 1011 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 TTC22Q5TAA0 569 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 SAMD1Q6SPF0 538 aaPredicted RBP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 MOV10L1Q9BXT6 1211 aaKnown RBP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 MROH8Q9H579 483 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 TOMM22Q9NS69 142 aa20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 COLQQ9Y215 455 aaPredicted RBP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
SCARNA2-201ENST00000458748 COL11A1P12107 1806 aaPredicted RBP20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 COPB2P35606 906 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 FAM47AQ5JRC9 791 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 ZNF589Q86UQ0 364 aaPredicted RBP20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 GMCL1P1Q8NEA9 526 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 ATG4CQ96DT6 458 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 SLF1Q9BQI6 1058 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 RNF41Q9H4P4 317 aaPredicted RBP20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 SLC5A4Q9NY91 659 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 PPP1R9AQ9ULJ8 1098 aa20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 CTDP1Q9Y5B0 961 aaPredicted RBP20.74■□□□□ 0.91
SCARNA2-201ENST00000458748 SLC25A27O95847 323 aa20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 PRKAR2AP13861 404 aaKnown RBP20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 ABRAQ8N0Z2 381 aa20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 RUFY2Q8WXA3 655 aa20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 PCDH10Q9P2E7 1040 aa20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 CTNNA3Q9UI47 895 aa20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 STX8Q9UNK0 236 aa20.73■□□□□ 0.91
SCARNA2-201ENST00000458748 ZNF213O14771 459 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 NDUFB10O96000 172 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 ERCC3P19447 782 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 PDE4AP27815 886 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 TRIM32Q13049 653 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 MFSD6Q6ZSS7 791 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 ANKLE1Q8NAG6 615 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 PRPF38AQ8NAV1 312 aaKnown RBP20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 HTATIP2Q9BUP3 242 aa20.72■□□□□ 0.91
SCARNA2-201ENST00000458748 VWA5AO00534 786 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 FGRP09769 529 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 CACNB2Q08289 660 aaPredicted RBP20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 TMEM132BQ14DG7 1078 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 MFSD14CQ5VZR4 134 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 NCAPG2Q86XI2 1143 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 FBXO28Q9NVF7 368 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
SCARNA2-201ENST00000458748 ZBED4O75132 1171 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 FDX1P10109 184 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 CCL14Q16627 93 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 AKNAD1Q5T1N1 836 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 SLFN13Q68D06 897 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 DPP9Q86TI2 863 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 LRRC47Q8N1G4 583 aaKnown RBP20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 DSCC1Q9BVC3 393 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 ISY1Q9ULR0 285 aaKnown RBP20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 RAD50Q92878 1312 aa20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 ZNFX1Q9P2E3 1918 aaKnown RBP20.7■□□□□ 0.9
SCARNA2-201ENST00000458748 FCER1AP12319 257 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 BMP3P12645 472 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 ADORA2AP29274 412 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 STAT3P40763 770 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 RIOX2Q8IUF8 465 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 STAG1Q8WVM7 1258 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 ESR2Q92731 530 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms