RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 ZNF341Q9BYN7 854 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 CWC22Q9HCG8 908 aaKnown RBP13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 SIPA1L1O43166 1804 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 PLIN4Q96Q06 1357 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 ERICH2A1L162 156 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 BCRP11274 1271 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 BMP8BP34820 402 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 PLCD1P51178 756 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 RCAN1P53805 252 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 ME3Q16798 604 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 CCDC178Q5BJE1 867 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 GPR153Q6NV75 609 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 FAM83AQ86UY5 434 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 PARK7Q99497 189 aaKnown RBP13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 SERPINB13Q9UIV8 391 aa13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
AC009404.1-202ENST00000439955 MYH8P13535 1937 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 NID2Q14112 1375 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 PFKFB2O60825 505 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 LARGE1O95461 756 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 RASA1P20936 1047 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 DDIT3P35638 169 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 MAGEA10P43363 369 aaPredicted RBP13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 CDK8P49336 464 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 EVX2Q03828 476 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 TMEM67Q5HYA8 995 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 GPAT2Q6NUI2 795 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 CHST3Q7LGC8 479 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 TCP11L1Q9NUJ3 509 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 PI4KBQ9UBF8 816 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
AC009404.1-202ENST00000439955 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 TNPO2O14787 897 aaKnown RBP13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 APOBRQ0VD83 1088 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 WTAPQ15007 396 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 SEC23AQ15436 765 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 LRIT3Q3SXY7 679 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 FOXP4Q8IVH2 680 aaPredicted RBP13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 FAM151AQ8WW52 585 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 GTF3C6Q969F1 213 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 ZSCAN10Q96SZ4 725 aaPredicted RBP13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 LY9Q9HBG7 655 aa13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 PAK6Q9NQU5 681 aaPredicted RBP13.71□□□□□ -0.21
AC009404.1-202ENST00000439955 TNKSO95271 1327 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 PRDM1O75626 825 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 TCP10Q12799 353 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 TDHQ8IZJ6 230 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 UBE2OQ9C0C9 1292 aaKnown RBP13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
AC009404.1-202ENST00000439955 KLF18A0A0U1RQI7 1052 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 DDTLA6NHG4 134 aaPredicted RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 DHX16O60231 1041 aaKnown RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 PDIA3P30101 505 aaKnown RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 TFAP4Q01664 338 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 APOA5Q6Q788 366 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 ENAHQ8N8S7 591 aaPredicted RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 PXYLP1Q8TE99 480 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 GPHNQ9NQX3 736 aaPredicted RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 HERC5Q9UII4 1024 aaKnown RBP13.69□□□□□ -0.22
AC009404.1-202ENST00000439955 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms