RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 NDUFB10O96000 172 aa21.88■■□□□ 1.09
MSH5-207ENST00000425703 MYCP01106 439 aaPredicted RBP21.88■■□□□ 1.09
MSH5-207ENST00000425703 EN2P19622 333 aaPredicted RBP21.88■■□□□ 1.09
MSH5-207ENST00000425703 ATG4CQ96DT6 458 aa21.88■■□□□ 1.09
MSH5-207ENST00000425703 DSCC1Q9BVC3 393 aa21.88■■□□□ 1.09
MSH5-207ENST00000425703 MOV10L1Q9BXT6 1211 aaKnown RBP21.88■■□□□ 1.09
MSH5-207ENST00000425703 RNF208Q9H0X6 261 aa21.88■■□□□ 1.09
MSH5-207ENST00000425703 IVNS1ABPQ9Y6Y0 642 aa21.88■■□□□ 1.09
MSH5-207ENST00000425703 DOCK3Q8IZD9 2030 aa21.88■■□□□ 1.09
MSH5-207ENST00000425703 RLFQ13129 1914 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 STRNO43815 780 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 RAD21O60216 631 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 PTPREP23469 700 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 NOVP48745 357 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 APBA2Q99767 749 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 MROH8Q9H579 483 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 TACC3Q9Y6A5 838 aa21.87■■□□□ 1.09
MSH5-207ENST00000425703 A0A0G2JMZ2 1700 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 VWA5AO00534 786 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 RANBP6O60518 1105 aaKnown RBP21.86■■□□□ 1.09
MSH5-207ENST00000425703 HOXC6P09630 235 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 CYP2B6P20813 491 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 GJA8P48165 433 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 MAP2K5Q13163 448 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 GRB14Q14449 540 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 STAG1Q8WVM7 1258 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 SLF1Q9BQI6 1058 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 UNC93B1Q9H1C4 597 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 RNF41Q9H4P4 317 aaPredicted RBP21.86■■□□□ 1.09
MSH5-207ENST00000425703 INCENPQ9NQS7 918 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 IL17RBQ9NRM6 502 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 TCP11L1Q9NUJ3 509 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 FBXO28Q9NVF7 368 aa21.86■■□□□ 1.09
MSH5-207ENST00000425703 RAD50Q92878 1312 aa21.85■■□□□ 1.09
MSH5-207ENST00000425703 SLC25A27O95847 323 aa21.85■■□□□ 1.09
MSH5-207ENST00000425703 AKNAD1Q5T1N1 836 aa21.85■■□□□ 1.09
MSH5-207ENST00000425703 WDR78Q5VTH9 848 aa21.85■■□□□ 1.09
MSH5-207ENST00000425703 CENPQQ7L2Z9 268 aaPredicted RBP21.85■■□□□ 1.09
MSH5-207ENST00000425703 PRPF38AQ8NAV1 312 aaKnown RBP21.85■■□□□ 1.09
MSH5-207ENST00000425703 TRIB2Q92519 343 aa21.85■■□□□ 1.09
MSH5-207ENST00000425703 PAK6Q9NQU5 681 aaPredicted RBP21.85■■□□□ 1.09
MSH5-207ENST00000425703 ZNF213O14771 459 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 ERCC3P19447 782 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 COPB2P35606 906 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 TMEM132BQ14DG7 1078 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 MAP3K21Q5TCX8 1036 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 MFSD6Q6ZSS7 791 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 ABRAQ8N0Z2 381 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 LRRC47Q8N1G4 583 aaKnown RBP21.84■■□□□ 1.09
MSH5-207ENST00000425703 RUFY2Q8WXA3 655 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 GMCL1Q96IK5 515 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 NUP88Q99567 741 aaPredicted RBP21.84■■□□□ 1.09
MSH5-207ENST00000425703 NBPF3Q9H094 633 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 CTNNA3Q9UI47 895 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 FEM1BQ9UK73 627 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 STX8Q9UNK0 236 aa21.84■■□□□ 1.09
MSH5-207ENST00000425703 RPTORQ8N122 1335 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 PLXNB2O15031 1838 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 ZKSCAN1P17029 563 aaPredicted RBP21.83■■□□□ 1.09
MSH5-207ENST00000425703 HAND2P61296 217 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 PLS1Q14651 629 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 SLFN13Q68D06 897 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 RIOX2Q8IUF8 465 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 REPS2Q8NFH8 660 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 U2AF1L4Q8WU68 220 aaKnown RBP21.83■■□□□ 1.09
MSH5-207ENST00000425703 TOMM22Q9NS69 142 aa21.83■■□□□ 1.09
MSH5-207ENST00000425703 ATP2A1O14983 1001 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 SGPL1O95470 568 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 FDX1P10109 184 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 BMP3P12645 472 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 CHMLP26374 656 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 STAT3P40763 770 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 TBC1D10CQ8IV04 446 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 SHISA4Q96DD7 197 aa21.82■■□□□ 1.08
MSH5-207ENST00000425703 ZNF214Q9UL59 606 aaPredicted RBP21.82■■□□□ 1.08
MSH5-207ENST00000425703 NMT2O60551 498 aa21.81■■□□□ 1.08
MSH5-207ENST00000425703 PLA2G6O60733 806 aa21.81■■□□□ 1.08
MSH5-207ENST00000425703 RRP12Q5JTH9 1297 aaKnown RBP21.81■■□□□ 1.08
MSH5-207ENST00000425703 SAMD1Q6SPF0 538 aaPredicted RBP21.81■■□□□ 1.08
MSH5-207ENST00000425703 NCAPG2Q86XI2 1143 aa21.81■■□□□ 1.08
MSH5-207ENST00000425703 TTC14Q96N46 770 aa21.81■■□□□ 1.08
MSH5-207ENST00000425703 TEX13BQ9BXU2 312 aa21.81■■□□□ 1.08
MSH5-207ENST00000425703 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.81■■□□□ 1.08
MSH5-207ENST00000425703 HMX1Q9NP08 348 aaPredicted RBP21.81■■□□□ 1.08
MSH5-207ENST00000425703 PARP14Q460N5 1801 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 PDE4DIPQ5VU43 2346 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 TNRC18O15417 2968 aaPredicted RBP21.8■■□□□ 1.08
MSH5-207ENST00000425703 ADORA2AP29274 412 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 SLC1A4P43007 532 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 IMMTQ16891 758 aaKnown RBP21.8■■□□□ 1.08
MSH5-207ENST00000425703 ESR2Q92731 530 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 CRISPLD2Q9H0B8 497 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 SLC5A4Q9NY91 659 aa21.8■■□□□ 1.08
MSH5-207ENST00000425703 ZBED4O75132 1171 aa21.79■■□□□ 1.08
MSH5-207ENST00000425703 TOP1P11387 765 aaKnown RBP21.79■■□□□ 1.08
MSH5-207ENST00000425703 FCER1AP12319 257 aa21.79■■□□□ 1.08
MSH5-207ENST00000425703 PRKAR2AP13861 404 aaKnown RBP21.79■■□□□ 1.08
MSH5-207ENST00000425703 STAT2P52630 851 aa21.79■■□□□ 1.08
MSH5-207ENST00000425703 OAZ1P54368 228 aa21.79■■□□□ 1.08
MSH5-207ENST00000425703 TRIM32Q13049 653 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms