RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 NOL9Q5SY16 702 aaKnown RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 C12orf60Q5U649 245 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 CWC27Q6UX04 472 aaKnown RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 LYPD8Q6UX82 237 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 ANKRD13AQ8IZ07 590 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 IFNL3Q8IZI9 196 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 LCORLQ8N3X6 602 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 SH3RF3Q8TEJ3 882 aaPredicted RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 TGFBRAP1Q8WUH2 860 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 MAP4K1Q92918 833 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 CSRNP1Q96S65 589 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 CNNM2Q9H8M5 875 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 NDUFB9Q9Y6M9 179 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 CDK5RAP2Q96SN8 1893 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 A0A0D9SFI3 127 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 EGFRP00533 1210 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 ASNSP08243 561 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 MCCP23508 829 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 TDO2P48775 406 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 INHBEP58166 350 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 GABPAQ06546 454 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 IMMTQ16891 758 aaKnown RBP9.11□□□□□ -0.95
RBM39-209ENST00000416529 TATDN1Q6P1N9 297 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 USP48Q86UV5 1035 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
RBM39-209ENST00000416529 MIGA1Q8NAN2 632 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 ZNF511Q8NB15 262 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 CDCA5Q96FF9 252 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 ARMT1Q9H993 441 aa9.11□□□□□ -0.95
RBM39-209ENST00000416529 GBA2Q9HCG7 927 aaPredicted RBP9.11□□□□□ -0.95
RBM39-209ENST00000416529 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 CLRN2A0PK11 232 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 TCP10L2B9ZVM9 353 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 ORC4O43929 436 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 APPP05067 770 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 HMGB1P09429 215 aaKnown RBP9.1□□□□□ -0.95
RBM39-209ENST00000416529 ZKSCAN1P17029 563 aaPredicted RBP9.1□□□□□ -0.95
RBM39-209ENST00000416529 CTHP32929 405 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 ANAPC15P60006 121 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 DYNLL1P63167 89 aaKnown RBP9.1□□□□□ -0.95
RBM39-209ENST00000416529 NFIAQ12857 509 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 LDLRAD1Q5T700 205 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 C16orf86Q6ZW13 317 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 CRACR2BQ8N4Y2 399 aaPredicted RBP9.1□□□□□ -0.95
RBM39-209ENST00000416529 BAP1Q92560 729 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 FAM227BQ96M60 508 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 KRT23Q9C075 422 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 SH2D4AQ9H788 454 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 CABP5Q9NP86 173 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 CSADQ9Y600 493 aa9.1□□□□□ -0.95
RBM39-209ENST00000416529 WDR19Q8NEZ3 1342 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 NAV1Q8NEY1 1877 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 DDX60LQ5H9U9 1706 aaKnown RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 USP17L12C9JPN9 530 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 USP17L21D6R901 530 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 M0R2C6 588 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 ZNF213O14771 459 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 WFS1O76024 890 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 FGAP02671 866 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 ZBTB48P10074 688 aaPredicted RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 ECE1P42892 770 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 MAP2K1Q02750 393 aaPredicted RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 PPATQ06203 517 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 PPARAQ07869 468 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 PDE4DQ08499 809 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 TRDNQ13061 729 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 DEFB115Q30KQ5 88 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 MAP1SQ66K74 1059 aaPredicted RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 CTR9Q6PD62 1173 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 MAPKAPK5Q8IW41 473 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.09□□□□□ -0.95
RBM39-209ENST00000416529 KCNB2Q92953 911 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 IL17RAQ96F46 866 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 TTC14Q96N46 770 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 GLIS2Q9BZE0 524 aaPredicted RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 UPF2Q9HAU5 1272 aaKnown RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 AS3MTQ9HBK9 375 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
RBM39-209ENST00000416529 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 PLIN4Q96Q06 1357 aa9.09□□□□□ -0.95
RBM39-209ENST00000416529 WDR33Q9C0J8 1336 aaKnown RBP9.08□□□□□ -0.96
RBM39-209ENST00000416529 DDTLA6NHG4 134 aaPredicted RBP9.08□□□□□ -0.96
RBM39-209ENST00000416529 C19orf81C9J6K1 198 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 CXCL11O14625 94 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
RBM39-209ENST00000416529 PSMA5P28066 241 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 CAP2P40123 477 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 PICALMQ13492 652 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 AKNAD1Q5T1N1 836 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 MFSD6Q6ZSS7 791 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 TMEM179Q6ZVK1 233 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 ERO1BQ86YB8 467 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 SCYL3Q8IZE3 742 aa9.08□□□□□ -0.96
RBM39-209ENST00000416529 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms