RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 RPUSD2Q8IZ73 545 aaKnown RBP9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 AGGF1Q8N302 714 aaeCLIP9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 PRPF38AQ8NAV1 312 aaKnown RBP9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 DNAJB8Q8NHS0 232 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 FBXL18Q96ME1 805 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 CCDC140Q96MF4 163 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 GP6Q9HCN6 339 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 MAPRE3Q9UPY8 281 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
SMC4P1-201ENST00000414479 PRODHO43272 600 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 RAPGEF3O95398 923 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 SPATA31C1P0DKV0 1188 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 PREPP48147 710 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 FOXB2Q5VYV0 432 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 ZNF385CQ66K41 422 aaPredicted RBP9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 THNSL2Q86YJ6 484 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 PPP1R13LQ8WUF5 828 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 HOMER2Q9NSB8 354 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 FHOD1Q9Y613 1164 aa9.64□□□□□ -0.87
SMC4P1-201ENST00000414479 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 WFS1O76024 890 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 GRB10Q13322 594 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 AHI1Q8N157 1196 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 PPM1KQ8N3J5 372 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 KCTD13Q8WZ19 329 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 IER2Q9BTL4 223 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 IRF2BPLQ9H1B7 796 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 ASCC2Q9H1I8 757 aaPredicted RBP9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 PRDM10Q9NQV6 1147 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 KLHL42Q9P2K6 505 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 ATP8A1Q9Y2Q0 1164 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 EMC9Q9Y3B6 208 aa9.63□□□□□ -0.87
SMC4P1-201ENST00000414479 C9orf172C9J069 976 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 APBA3O96018 575 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 GABREP78334 506 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 CBX2Q14781 532 aaPredicted RBP9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 PLEKHG6Q3KR16 790 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 ARHGEF39Q8N4T4 335 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 ADCY4Q8NFM4 1077 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 DSCC1Q9BVC3 393 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 SEMA6CQ9H3T2 930 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 CGGBP1Q9UFW8 167 aaPredicted RBP9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 KCNH3Q9ULD8 1083 aa9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 TPX2Q9ULW0 747 aaKnown RBP9.62□□□□□ -0.87
SMC4P1-201ENST00000414479 ALG1L2C9J202 215 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 PDGFRBP09619 1106 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 RXRBP28702 533 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 SNRPNP63162 240 aaKnown RBP9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 CCDC181Q5TID7 509 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 YOD1Q5VVQ6 348 aaPredicted RBP9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 Q6ZS46 218 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 CDH24Q86UP0 819 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 SYTL5Q8TDW5 730 aaPredicted RBP9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 MRGPRX3Q96LB0 322 aa9.61□□□□□ -0.87
SMC4P1-201ENST00000414479 KCNH1O95259 989 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 CPP00450 1065 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 PMLP29590 882 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 HOXC12P31275 282 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 FLT3P36888 993 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 NFKB2Q00653 900 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 TRIM61Q5EBN2 209 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 LRRTM3Q86VH5 581 aa9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 ZNF513Q8N8E2 541 aaPredicted RBP9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 EZH1Q92800 747 aaPredicted RBP9.6□□□□□ -0.87
SMC4P1-201ENST00000414479 A0A087X0B3 334 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 KRBA1A5PL33 1030 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 SHOXO15266 292 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 KCNQ2O43526 872 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 SLITRK5O94991 958 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 NFICP08651 508 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 KCNJ6P48051 423 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 MAP4K2Q12851 820 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 FBLIM1Q8WUP2 373 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 VWCEQ96DN2 955 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 NOL6Q9H6R4 1146 aaKnown RBP9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 NDOR1Q9UHB4 597 aa9.59□□□□□ -0.87
SMC4P1-201ENST00000414479 NAT1P18440 290 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 ZNF445P59923 1031 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 AMPD2Q01433 879 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 GRIK4Q16099 956 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 HSP90AB2PQ58FF8 381 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 CNNM4Q6P4Q7 775 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 MAMDC2Q7Z304 686 aaPredicted RBP9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 FIBCD1Q8N539 461 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 BTN2A2Q8WVV5 523 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 OSBP2Q969R2 916 aa9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 UTP4Q969X6 686 aaKnown RBP9.58□□□□□ -0.88
SMC4P1-201ENST00000414479 ALX3O95076 343 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms