RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 FAM47AQ5JRC9 791 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 VPS53Q5VIR6 699 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 UBE2Q1Q7Z7E8 422 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 NCAPG2Q86XI2 1143 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 CEP95Q96GE4 821 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 IGKV6D-41A0A0C4DH26 115 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 A0A0D9SFI3 127 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 FOXP2O15409 715 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 STRNO43815 780 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 NDUFB10O96000 172 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 CTDSPL2Q05D32 466 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 GRB14Q14449 540 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 DPP9Q86TI2 863 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 NEDD1Q8NHV4 660 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 NUP88Q99567 741 aaPredicted RBP15.82■□□□□ 0.12
SDF4-203ENST00000403997 HTATIP2Q9BUP3 242 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 PPP1R9AQ9ULJ8 1098 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 ADAMTS5Q9UNA0 930 aa15.82■□□□□ 0.12
SDF4-203ENST00000403997 VWA5AO00534 786 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 TTLL1O95922 423 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 ADORA2AP29274 412 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 IRX6P78412 446 aaPredicted RBP15.81■□□□□ 0.12
SDF4-203ENST00000403997 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
SDF4-203ENST00000403997 TMEM132BQ14DG7 1078 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 ALX1Q15699 326 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 NPLOC4Q8TAT6 608 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 MKL1Q969V6 931 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 OSBPL3Q9H4L5 887 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 MROH8Q9H579 483 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 FLRT1Q9NZU1 646 aa15.81■□□□□ 0.12
SDF4-203ENST00000403997 TSPY2A6NKD2 308 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 SLC25A27O95847 323 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 HOXC6P09630 235 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 SDSP20132 328 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 CCND3P30281 292 aaPredicted RBP15.8■□□□□ 0.12
SDF4-203ENST00000403997 STAT3P40763 770 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 LRRC47Q8N1G4 583 aaKnown RBP15.8■□□□□ 0.12
SDF4-203ENST00000403997 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
SDF4-203ENST00000403997 SLF1Q9BQI6 1058 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 RLFQ13129 1914 aa15.8■□□□□ 0.12
SDF4-203ENST00000403997 FGAP02671 866 aa15.79■□□□□ 0.12
SDF4-203ENST00000403997 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
SDF4-203ENST00000403997 FCER1AP12319 257 aa15.79■□□□□ 0.12
SDF4-203ENST00000403997 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
SDF4-203ENST00000403997 ZNF589Q86UQ0 364 aaPredicted RBP15.79■□□□□ 0.12
SDF4-203ENST00000403997 PRPF38AQ8NAV1 312 aaKnown RBP15.79■□□□□ 0.12
SDF4-203ENST00000403997 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
SDF4-203ENST00000403997 ANAPC4Q9UJX5 808 aa15.79■□□□□ 0.12
SDF4-203ENST00000403997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■■■■□ 25.3
SDF4-203ENST00000403997 CTDP1Q9Y5B0 961 aaPredicted RBP15.79■□□□□ 0.12
SDF4-203ENST00000403997 H0YGN5 161 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 RANBP6O60518 1105 aaKnown RBP15.78■□□□□ 0.12
SDF4-203ENST00000403997 COBLO75128 1261 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 CYP2C19P33261 490 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 PPP4R3BQ5MIZ7 849 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 SLFN13Q68D06 897 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 ABRAQ8N0Z2 381 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 ANKLE1Q8NAG6 615 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 GMCL1P1Q8NEA9 526 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 DIS3LQ8TF46 1054 aaKnown RBP15.78■□□□□ 0.12
SDF4-203ENST00000403997 KIFC2Q96AC6 838 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 TOMM22Q9NS69 142 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 OGDHLQ9ULD0 1010 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 ISY1Q9ULR0 285 aaKnown RBP15.78■□□□□ 0.12
SDF4-203ENST00000403997 SYNPO2Q9UMS6 1093 aa15.78■□□□□ 0.12
SDF4-203ENST00000403997 GREB1LQ9C091 1923 aaPredicted RBP15.78■□□□□ 0.12
SDF4-203ENST00000403997 PLIN4Q96Q06 1357 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 CCDC171Q6TFL3 1326 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 CNGA1P29973 690 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 SLC4A3P48751 1232 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 MFAP1P55081 439 aaKnown RBP15.77■□□□□ 0.12
SDF4-203ENST00000403997 HABP4Q5JVS0 413 aaKnown RBP15.77■□□□□ 0.12
SDF4-203ENST00000403997 OLFML2BQ68BL8 750 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 CHMP4CQ96CF2 233 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 MMP19Q99542 508 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 DIAPH3Q9NSV4 1193 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 ZNF214Q9UL59 606 aaPredicted RBP15.77■□□□□ 0.12
SDF4-203ENST00000403997 STX8Q9UNK0 236 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 NR2E3Q9Y5X4 410 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
SDF4-203ENST00000403997 ORC4O43929 436 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 EVI5O60447 810 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 NMT2O60551 498 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 ZBED4O75132 1171 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 BMP3P12645 472 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 COPB2P35606 906 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 HAND2P61296 217 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 RRP12Q5JTH9 1297 aaKnown RBP15.76■□□□□ 0.11
SDF4-203ENST00000403997 LHX8Q68G74 356 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 CWC27Q6UX04 472 aaKnown RBP15.76■□□□□ 0.11
SDF4-203ENST00000403997 CPXCR1Q8N123 301 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 REPS2Q8NFH8 660 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms