RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 VSNL1P62760 191 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 PTGDRQ13258 359 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 PRPF4BQ13523 1007 aaKnown RBP14.85□□□□□ -0.03
NFKB1-202ENST00000394820 MAP9Q49MG5 647 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 FOXR1Q6PIV2 292 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 ADGRA1Q86SQ6 560 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 ZNF654Q8IZM8 581 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 IGDCC4Q8TDY8 1250 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 RABGGTAQ92696 567 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 CDC23Q9UJX2 597 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 TUBGCP6Q96RT7 1819 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 RIC1Q4ADV7 1423 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 TMCO5BA8MYB1 307 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 GUCY2FP51841 1108 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 GDAQ9Y2T3 454 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 ZNF142P52746 1687 aaPredicted RBP14.85□□□□□ -0.03
NFKB1-202ENST00000394820 TNKSO95271 1327 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 PAFAH1B1P43034 410 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 CASP8Q14790 479 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 DYMQ7RTS9 669 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 ESR2Q92731 530 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 KRT2P35908 639 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 KIF5AQ12840 1032 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 RAD9BQ6WBX8 426 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 PLCD4Q9BRC7 762 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 CNNM2Q9H8M5 875 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 TBC1D7Q9P0N9 293 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 MYO6Q9UM54 1294 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 PHLPP2Q6ZVD8 1323 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 ALS2Q96Q42 1657 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 BUB1O43683 1085 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 CAMTA2O94983 1202 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 TBC1D8O95759 1140 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 IRX3P78415 501 aaPredicted RBP14.84□□□□□ -0.03
NFKB1-202ENST00000394820 NCAPHQ15003 741 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 PARP10Q53GL7 1025 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 CEP57Q86XR8 500 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 REXO1L1PQ8IX06 675 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 CHP1Q99653 195 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 SALL1Q9NSC2 1324 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 EBAG9O00559 213 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 IKBKBO14920 756 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 ARID4AP29374 1257 aaPredicted RBP14.84□□□□□ -0.03
NFKB1-202ENST00000394820 ACTN2P35609 894 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 SLC51AQ86UW1 340 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 DZIP1Q86YF9 867 aaKnown RBP14.84□□□□□ -0.03
NFKB1-202ENST00000394820 IQUBQ8NA54 791 aa14.84□□□□□ -0.03
NFKB1-202ENST00000394820 NOA1Q8NC60 698 aaKnown RBP14.84□□□□□ -0.03
NFKB1-202ENST00000394820 RNF41Q9H4P4 317 aaPredicted RBP14.84□□□□□ -0.03
NFKB1-202ENST00000394820 H3BQF6 201 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 RNF40O75150 1001 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 CYP2D6P10635 497 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 NLRP3Q96P20 1036 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 GOLGA6CA6NDK9 693 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 GOLGA6DP0CG33 693 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 C2orf54Q08AI8 447 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 LETM2Q2VYF4 491 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 TTC38Q5R3I4 469 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 FANCBQ8NB91 859 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 CPVLQ9H3G5 476 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 GOLGA6AQ9NYA3 693 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 SMARCAL1Q9NZC9 954 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
NFKB1-202ENST00000394820 ABL1P00519 1130 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 IVLP07476 585 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 FXR1P51114 621 aaKnown RBP eCLIP14.82□□□□□ -0.04
NFKB1-202ENST00000394820 TCERG1LQ5VWI1 586 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 RBM43Q6ZSC3 357 aaKnown RBP14.82□□□□□ -0.04
NFKB1-202ENST00000394820 JAKMIP2Q96AA8 810 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 CTAGE1Q96RT6 745 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 TRIM31Q9BZY9 425 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 MCM9Q9NXL9 1143 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 MRC1P22897 1456 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 ARFGEF2Q9Y6D5 1785 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 H2AFXP16104 143 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-202ENST00000394820 IKQ13123 557 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-202ENST00000394820 PAK1Q13153 545 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 TBC1D9BQ66K14 1250 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 CSGALNACT2Q8N6G5 542 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 TC2NQ8N9U0 490 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 FAM76AQ8TAV0 307 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 PNKPQ96T60 521 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 USP54Q70EL1 1684 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 BCL9O00512 1426 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 TCRBV5S4A2TA0A5A2 114 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 KCNJ18B7U540 433 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 NDUFAB1O14561 156 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 KRT86O43790 486 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 PLEKHA8P1O95397 391 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 DEXIO95424 95 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 GOLGA8HP0CJ92 632 aa14.82□□□□□ -0.04
NFKB1-202ENST00000394820 KCNJ12Q14500 433 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms