RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 IFNB1P01574 187 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SMCR8Q8TEV9 937 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 PTPN22Q9Y2R2 807 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 AXIN2Q9Y2T1 843 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SYNMO15061 1565 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SHANK2Q9UPX8 1470 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 A0A0G2JLW4 131 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 LIG3P49916 1009 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 TNNC1P63316 161 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 EHHADHQ08426 723 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SLC9C1Q4G0N8 1177 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 BLIDQ8IZY5 108 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ZNF274Q96GC6 653 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 NOX5Q96PH1 765 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 RASSF4Q9H2L5 321 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SRP68Q9UHB9 627 aaKnown RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 GCC2Q8IWJ2 1684 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 FAM196BA6NMK8 535 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 CLIC2O15247 247 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 CALCOCO2Q13137 446 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SMAP1Q8IYB5 467 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 ZBTB38Q8NAP3 1195 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 SAR1BQ9Y6B6 198 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 MYOM2P54296 1465 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 PLEKHG3A1L390 1219 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 LRRN2O75325 713 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 PDE8BO95263 885 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 DLATP10515 647 aaKnown RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 CYP2D6P10635 497 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ZSCAN26Q16670 478 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 PEX26Q7Z412 305 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 PIH1D3Q9NQM4 214 aaKnown RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 HDAC9Q9UKV0 1011 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 TAF6LQ9Y6J9 622 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 CEP170Q5SW79 1584 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ZMYM6O95789 1325 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 TESPA1A2RU30 521 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 FOXN1O15353 648 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SRGAP2O75044 1071 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 PLEKHA8P1O95397 391 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 CCDC172P0C7W6 258 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ETF1P62495 437 aaKnown RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 PABPC4Q13310 644 aaKnown RBP eCLIP5.54□□□□□ -1.52
LTN1-202ENST00000389194 KRT71Q3SY84 523 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 GSPT2Q8IYD1 628 aaKnown RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 MAGED2Q9UNF1 606 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 LMTK3Q96Q04 1460 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 SFI1A8K8P3 1242 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 CD19P15391 556 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PSMC4P43686 418 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 C2orf54Q08AI8 447 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PSMD6Q15008 389 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 KAZNQ674X7 775 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 GIGYF2Q6Y7W6 1299 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 TMTC1Q8IUR5 882 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 IL25Q9H293 177 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 GOLPH3LQ9H4A5 285 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 DNAJC17Q9NVM6 304 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 DNM3Q9UQ16 869 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 BCS1LQ9Y276 419 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ARHGEF10O15013 1369 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 GDF11O95390 407 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 CMA1P23946 247 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ERFEQ4G0M1 354 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 CEP85LQ5SZL2 805 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 ZCCHC17Q9NP64 241 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 ST7Q9NRC1 585 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 STAP2Q9UGK3 403 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 IFNAR2P48551 515 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 UBE2SQ16763 222 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 CCDC144BQ3MJ40 725 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ZMYM1Q5SVZ6 1142 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 SEL1L2Q5TEA6 688 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 SFMBT2Q5VUG0 894 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ATL3Q6DD88 541 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ANKS4BQ8N8V4 417 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PPP1R16BQ96T49 567 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PCDHA12Q9UN75 941 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 CSPG5O95196 566 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 BTDP43251 543 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 CRKLP46109 303 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 TOB2Q14106 344 aaPredicted RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 OR8K1Q8NGG5 319 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 LMBR1Q8WVP7 490 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 JDP2Q8WYK2 163 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 DBNDD1Q9H9R9 158 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 IMPACTQ9P2X3 320 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 KIAA1024Q9UPX6 916 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.53□□□□□ -1.52
LTN1-202ENST00000389194 IGKV5-2P06315 115 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 HOXB7P09629 217 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 SCG2P13521 617 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PLCG2P16885 1265 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 RPL13P26373 211 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 RPS6KA1Q15418 735 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 LARGE2Q8N3Y3 721 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms