RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 TEPSINQ96N21 525 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 RTEL1Q9NZ71 1219 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
POLR1E-202ENST00000377798 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
POLR1E-202ENST00000377798 KRT2P35908 639 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
POLR1E-202ENST00000377798 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
POLR1E-202ENST00000377798 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
POLR1E-202ENST00000377798 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
POLR1E-202ENST00000377798 ZBTB21Q9ULJ3 1066 aa17.04■□□□□ 0.32
POLR1E-202ENST00000377798 SYNPO2Q9UMS6 1093 aa17.04■□□□□ 0.32
POLR1E-202ENST00000377798 ATAD5Q96QE3 1844 aa17.04■□□□□ 0.32
POLR1E-202ENST00000377798 YEATS4O95619 227 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 NR5A1Q13285 461 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 GMCL1P1Q8NEA9 526 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 RRP36Q96EU6 259 aaKnown RBP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 CAP2P40123 477 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 EPS15P42566 896 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 NPY5RQ15761 445 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 C9orf131Q5VYM1 1079 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 ANO1Q5XXA6 986 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 GPKOWQ92917 476 aaPredicted RBP eCLIP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 UBA5Q9GZZ9 404 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 GPCPD1Q9NPB8 672 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 BARHL2Q9NY43 387 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 TMEM63CQ9P1W3 806 aa17.03■□□□□ 0.32
POLR1E-202ENST00000377798 SEC63Q9UGP8 760 aaKnown RBP17.03■□□□□ 0.32
POLR1E-202ENST00000377798 CALML3P27482 149 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 NLRP5P59047 1200 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 ANGEL2Q5VTE6 544 aaKnown RBP17.02■□□□□ 0.32
POLR1E-202ENST00000377798 SLFN13Q68D06 897 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 WWC2Q6AWC2 1192 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 HEATR3Q7Z4Q2 680 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 LINC00301Q8NCQ3 95 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 CCDC148Q8NFR7 591 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
POLR1E-202ENST00000377798 PGBD1Q96JS3 809 aa17.02■□□□□ 0.32
POLR1E-202ENST00000377798 F5H6K3 240 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 SLC1A4P43007 532 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 KLRC3Q07444 240 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 STK38Q15208 465 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 RILPL1Q5EBL4 403 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 KCTD1Q719H9 257 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 KCNG4Q8TDN1 519 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 PIGSQ96S52 555 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 PHF20L1A8MW92 1017 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 STXBP3O00186 592 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 RAD21O60216 631 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
POLR1E-202ENST00000377798 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 GMCL1Q96IK5 515 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 VAT1LQ9HCJ6 419 aa17.01■□□□□ 0.31
POLR1E-202ENST00000377798 A0A1W2PRG0 241 aa17■□□□□ 0.31
POLR1E-202ENST00000377798 ASNSP08243 561 aa17■□□□□ 0.31
POLR1E-202ENST00000377798 HIRAP54198 1017 aaPredicted RBP17■□□□□ 0.31
POLR1E-202ENST00000377798 SF3A1Q15459 793 aaKnown RBP17■□□□□ 0.31
POLR1E-202ENST00000377798 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
POLR1E-202ENST00000377798 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
POLR1E-202ENST00000377798 GALNT17Q6IS24 598 aa17■□□□□ 0.31
POLR1E-202ENST00000377798 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
POLR1E-202ENST00000377798 GGA3Q9NZ52 723 aa17■□□□□ 0.31
POLR1E-202ENST00000377798 hCG_1984214I3L0E3 225 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 SPTLC2O15270 562 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 NDUFB10O96000 172 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 ME1P48163 572 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 TOB1P50616 345 aaPredicted RBP16.99■□□□□ 0.31
POLR1E-202ENST00000377798 ADGRF4Q8IZF3 695 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 ZNF713Q8N859 430 aaPredicted RBP16.99■□□□□ 0.31
POLR1E-202ENST00000377798 JMJD4Q9H9V9 463 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 ADARB2Q9NS39 739 aaKnown RBP16.99■□□□□ 0.31
POLR1E-202ENST00000377798 PCDHA4Q9UN74 947 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 TMX2Q9Y320 296 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 ECE1P42892 770 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 NBPF12Q5TAG4 269 aaPredicted RBP16.99■□□□□ 0.31
POLR1E-202ENST00000377798 BLIDQ8IZY5 108 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 DAGLBQ8NCG7 672 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 BICD2Q8TD16 824 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
POLR1E-202ENST00000377798 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
POLR1E-202ENST00000377798 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms