RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 IFIT3O14879 490 aaKnown RBP13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CDKL5O76039 1030 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 INPP5BP32019 993 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PABPC4Q13310 644 aaKnown RBP eCLIP13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SNAPC2Q13487 334 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 HMGN5P82970 282 aaKnown RBP13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PIK3CDO00329 1044 aa13.02□□□□□ -0.32
CSGALNACT2-201ENST00000374466 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ZBTB43O43298 467 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CTDNEP1O95476 244 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 NDUFB10O96000 172 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ME3Q16798 604 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 F5H6K3 240 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 M0R2N6 131 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 KLRC3Q07444 240 aa13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ORC2Q13416 577 aaPredicted RBP13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
CSGALNACT2-201ENST00000374466 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CELF2O95319 508 aaKnown RBP13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 DSG3P32926 999 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 NEK4P51957 841 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CHURC1Q8WUH1 139 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CCDC69A6NI79 296 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CAPN2P17655 700 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SCRN1Q12765 414 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 KIAA1755Q5JYT7 1200 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SLC38A10Q9HBR0 1119 aa13.01□□□□□ -0.33
CSGALNACT2-201ENST00000374466 TRAF5O00463 557 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 BMP3P12645 472 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SREBF2Q12772 1141 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 WASF1Q92558 559 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 OPTNQ96CV9 577 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 GCLCP48506 637 aaPredicted RBP13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 MORC4Q8TE76 937 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PLXNA1Q9UIW2 1896 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 VCAM1P19320 739 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SLFN13Q68D06 897 aa13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ZSCAN21Q9Y5A6 473 aaPredicted RBP13□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CNMDO75829 334 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CD2BP2O95400 341 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PARP1P09874 1014 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ECE1P42892 770 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PKN1Q16512 942 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SENP2Q9HC62 589 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PNMA3Q9UL41 463 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ABCB11O95342 1321 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 RTN1Q16799 776 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 BRF1Q92994 677 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ZNF536O15090 1300 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 KLF18A0A0U1RQI7 1052 aa12.99□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 METAP2P50579 478 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 NOGQ13253 232 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SYNE3Q6ZMZ3 975 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 MIGA2Q7L4E1 593 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 NMT2O60551 498 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 DEXIO95424 95 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CDC27P30260 824 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 BECN1Q14457 450 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 JMYQ8N9B5 988 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ZKSCAN4Q969J2 545 aaPredicted RBP12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 RPTORQ8N122 1335 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 GDF11O95390 407 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 ICAM1P05362 532 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 SRBD1Q8N5C6 995 aaKnown RBP12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
CSGALNACT2-201ENST00000374466 CYTH3O43739 400 aa12.97□□□□□ -0.33
CSGALNACT2-201ENST00000374466 PRDM1O75626 825 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms