RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ZNF449Q6P9G9 518 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TRIM74Q86UV6 250 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TRIM73Q86UV7 250 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SPZ1Q9BXG8 430 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 PLCH2O75038 1416 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SPATA31E1Q6ZUB1 1445 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 MAPK13O15264 365 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 PER1O15534 1290 aaPredicted RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 UBA7P41226 1012 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TMEM154Q6P9G4 183 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 MAIP1Q8WWC4 291 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ATP2A3Q93084 1043 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 CALML4Q96GE6 196 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ATP10AO60312 1499 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SLC9C1Q4G0N8 1177 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SEL1L2Q5TEA6 688 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 DHX32Q7L7V1 743 aaKnown RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.53□□□□□ -1.527e-9■■■■■ 72.6
SKP1-202ENST00000353411 DDX23Q9BUQ8 820 aaKnown RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 NRDE2Q9H7Z3 1164 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 MMRN2Q9H8L6 949 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TBC1D23Q9NUY8 699 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 KLHL33A6NCF5 533 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ZRANB2O95218 330 aaKnown RBP eCLIP5.53□□□□□ -1.52
SKP1-202ENST00000353411 VPS41P49754 854 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 MRPL12P52815 198 aaKnown RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 KIAA0825Q8IV33 1275 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SCYL3Q8IZE3 742 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 RHPN1Q8TCX5 695 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ATP6V1G3Q96LB4 118 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 CATSPER2Q96P56 530 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 FAM192AQ9GZU8 254 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SLC12A5Q9H2X9 1139 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 GCC2Q8IWJ2 1684 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 RAD23BP54727 409 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 GSCP56915 257 aaPredicted RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 UBL4BQ8N7F7 174 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 FTOQ9C0B1 505 aaKnown RBP eCLIP5.53□□□□□ -1.52
SKP1-202ENST00000353411 BOLA2Q9H3K6 86 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 INTUQ9ULD6 942 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SHANK2Q9UPX8 1470 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 USP27XA6NNY8 438 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 PDE6BP35913 854 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TBC1D8BQ0IIM8 1120 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 YTHDF3Q7Z739 585 aaKnown RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 C10orf88Q9H8K7 445 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 HELLSQ9NRZ9 838 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 PPME1Q9Y570 386 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 DYTNA2CJ06 578 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 GOLGA8AA7E2F4 631 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 KDM1AO60341 852 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TPD52P55327 224 aaPredicted RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 PAK1Q13153 545 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ANKRD20A4Q4UJ75 823 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ANKRD20A8PQ5CZ79 823 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ANKRD20A2Q5SQ80 823 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ANKRD20A1Q5TYW2 823 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TSHZ3Q63HK5 1081 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 KLC3Q6P597 504 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ZKSCAN4Q969J2 545 aaPredicted RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 CHMP6Q96FZ7 201 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 RHBDL2Q9NX52 303 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 EXOC5O00471 708 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SASH1O94885 1247 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TRIM37O94972 964 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 LSP1P33241 339 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 CA8P35219 290 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 DDIT3P35638 169 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 TMEM266Q2M3C6 531 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 Q4G0T1 1027 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 RILPL1Q5EBL4 403 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 C11orf57Q6ZUT1 292 aaPredicted RBP5.53□□□□□ -1.52
SKP1-202ENST00000353411 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 HAUS8Q9BT25 410 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 LCMT1Q9UIC8 334 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SART1O43290 800 aaKnown RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 ANP32DO95626 131 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 MDH1P40925 334 aaKnown RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 USP14P54578 494 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 PPP2R2AP63151 447 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ATP8B2P98198 1209 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CSRNP2Q9H175 543 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 KDM4CQ9H3R0 1056 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 MCM8Q9UJA3 840 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 UBN2Q6ZU65 1347 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ACADSP16219 412 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CASP14P31944 242 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 NRBF2Q96F24 287 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 SH2D4AQ9H788 454 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 C21orf2O43822 256 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 MGEA5O60502 916 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CMA1P23946 247 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CTNNA2P26232 953 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 STX17P56962 302 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 STRN3Q13033 797 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 KLHL7Q8IXQ5 586 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TTC5Q8N0Z6 440 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 NUDCD1Q96RS6 583 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 SPOCK3Q9BQ16 436 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TEX13AQ9BXU3 409 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms