RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NKIRAS1Q9NYS0 192 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 MYO1AQ9UBC5 1043 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 NDUFAB1O14561 156 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 BTDP43251 543 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 CUL4AQ13619 759 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 TEKT1Q969V4 418 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 PSTPIP2Q9H939 334 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 PEX26Q7Z412 305 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 CCDC51Q96ER9 411 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 OR52Z1P0C646 297 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 PRR16Q569H4 304 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 GPR161Q8N6U8 529 aaKnown RBP17.75■□□□□ 0.43
PTPN11-201ENST00000351677 SAR1BQ9Y6B6 198 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 CRKLP46109 303 aaKnown RBP17.74■□□□□ 0.43
PTPN11-201ENST00000351677 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 SMC6Q96SB8 1091 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 CSRNP2Q9H175 543 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 GPR108Q9NPR9 543 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 MYOCDQ8IZQ8 938 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 PABPN1LA6NDY0 278 aaKnown RBP17.74■□□□□ 0.43
PTPN11-201ENST00000351677 RPN1P04843 607 aaKnown RBP17.74■□□□□ 0.43
PTPN11-201ENST00000351677 PTPN21Q16825 1174 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 DOK7Q18PE1 504 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 NEK8Q86SG6 692 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 GINS2Q9Y248 185 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 DDAH1O94760 285 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 SLC39A2Q9NP94 309 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 ZNF215Q9UL58 517 aaPredicted RBP17.74■□□□□ 0.43
PTPN11-201ENST00000351677 PCDHA12Q9UN75 941 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 SIK1P57059 783 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 PCDHA5Q9Y5H7 936 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 FAM169AQ9Y6X4 670 aa17.74■□□□□ 0.43
PTPN11-201ENST00000351677 ZBED4O75132 1171 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.73■□□□□ 0.437e-7■■□□□ 12.5
PTPN11-201ENST00000351677 ASIC3Q9UHC3 531 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 GAS7O60861 476 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 CYP2J2P51589 502 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 GTPBP6O43824 516 aaPredicted RBP17.73■□□□□ 0.43
PTPN11-201ENST00000351677 BCRP11274 1271 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 PPM1FP49593 454 aaPredicted RBP17.73■□□□□ 0.43
PTPN11-201ENST00000351677 PLA2R1Q13018 1463 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 SETDB1Q15047 1291 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 PTPROQ16827 1216 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 TRIML1Q8N9V2 468 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 KDM3AQ9Y4C1 1321 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 GOLGA8FQ08AF8 430 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 GOLGA8DPQ0D2H9 430 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 SLC39A14Q15043 492 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 C11orf57Q6ZUT1 292 aaPredicted RBP17.73■□□□□ 0.43
PTPN11-201ENST00000351677 NOP56O00567 594 aaKnown RBP17.73■□□□□ 0.43
PTPN11-201ENST00000351677 DLGAP5Q15398 846 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 SPATA1Q5VX52 437 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 PUS7LQ9H0K6 701 aaKnown RBP17.73■□□□□ 0.43
PTPN11-201ENST00000351677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTPN11-201ENST00000351677 SSX2IPQ9Y2D8 614 aa17.73■□□□□ 0.43
PTPN11-201ENST00000351677 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 DYNLL1P63167 89 aaKnown RBP17.72■□□□□ 0.43
PTPN11-201ENST00000351677 PTPN12Q05209 780 aaKnown RBP17.72■□□□□ 0.43
PTPN11-201ENST00000351677 PAK2Q13177 524 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 A0A1W2PQ27 194 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 A0A1W2PQ64 194 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 A0A1W2PQD8 194 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 DPCR1Q3MIW9 517 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
PTPN11-201ENST00000351677 OSBP2Q969R2 916 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 SASH1O94885 1247 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 APBB1IPQ7Z5R6 666 aaPredicted RBP17.72■□□□□ 0.43
PTPN11-201ENST00000351677 PPIP5K2O43314 1243 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 PRKAB2O43741 272 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 PANK4Q9NVE7 773 aa17.72■□□□□ 0.43
PTPN11-201ENST00000351677 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 PPP1R21Q6ZMI0 780 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 PI4K2BQ8TCG2 481 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 PPM1EQ8WY54 764 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 TMEM94Q12767 1356 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 ZNF804BA4D1E1 1349 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 BUB1O43683 1085 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 ADD2P35612 726 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 DNM2P50570 870 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 SF3A3Q12874 501 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 KIAA0825Q8IV33 1275 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 DDX25Q9UHL0 483 aaKnown RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 GNA14O95837 355 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 XRCC5P13010 732 aaKnown RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 ABCB4P21439 1286 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 ATP5DP30049 168 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms