RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 MCM7P33993 719 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 SLC35G1Q2M3R5 365 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 MNS1Q8NEH6 495 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 CPLX3Q8WVH0 158 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 BRMS1Q9HCU9 246 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 ADGRG1Q9Y653 693 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 PLA2G4AP47712 749 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.236e-9■■■■□ 24.9
ARHGEF1-202ENST00000347545 TERF2Q15554 542 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 IL17RBQ9NRM6 502 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 NLRP5P59047 1200 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 SBK1Q52WX2 424 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 CRNKL1Q9BZJ0 848 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 SEC31AO94979 1220 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 USP17L8P0C7I0 530 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 FECHP22830 423 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 CASP14P31944 242 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 ATP8A2Q9NTI2 1148 aa16.48■□□□□ 0.23
ARHGEF1-202ENST00000347545 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 KRT31Q15323 416 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 CDC25AP30304 524 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 HIBADHP31937 336 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 CCT6AP40227 531 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 PPP2R3AQ06190 1150 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 M0R2N6 131 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 TRAPPC10P48553 1259 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 RASGRP4Q8TDF6 673 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 LZTFL1Q9NQ48 299 aa16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 LIMA1Q9UHB6 759 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-202ENST00000347545 ABL1P00519 1130 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 AMIGO3Q86WK7 504 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 IQUBQ8NA54 791 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 ITIH6Q6UXX5 1313 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 CCDC175P0C221 793 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 TM4SF1P30408 202 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 RRAGBQ5VZM2 374 aa16.46■□□□□ 0.23
ARHGEF1-202ENST00000347545 BTAF1O14981 1849 aa16.46■□□□□ 0.22
ARHGEF1-202ENST00000347545 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 LRRC10BA6NIK2 292 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 RASGRP2Q7LDG7 609 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 LRRC15Q8TF66 581 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 GDAQ9Y2T3 454 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 SASH3O75995 380 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 ERVK-24P63145 666 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
ARHGEF1-202ENST00000347545 GRIK5Q16478 980 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 NAALADL2Q58DX5 795 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 BLIDQ8IZY5 108 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 CCDC12Q8WUD4 166 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 MCM9Q9NXL9 1143 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 RPN1P04843 607 aaKnown RBP16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 IRF2BP1Q8IU81 584 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 TFAP4Q01664 338 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 ACRBPQ8NEB7 543 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 VPS16Q9H269 839 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 TMEM60Q9H2L4 133 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 TAB2Q9NYJ8 693 aa16.44■□□□□ 0.22
ARHGEF1-202ENST00000347545 TAF1LQ8IZX4 1826 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 TEX35Q5T0J7 233 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 UBXN6Q9BZV1 441 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 ROBO3Q96MS0 1386 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 CYTH3O43739 400 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 PRCPP42785 496 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 PAK1Q13153 545 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 TCP11X2Q5H9J9 407 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 CC2D1AQ6P1N0 951 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 TMCO3Q6UWJ1 677 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 SH3RF3Q8TEJ3 882 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
ARHGEF1-202ENST00000347545 USP17L3A6NCW0 530 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1167.7 ms