RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 B4DLN1 442 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
SCARB1-202ENST00000339570 ATP2B2Q01814 1243 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 ANKRD13CQ8N6S4 541 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 STAG1Q8WVM7 1258 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 C2orf54Q08AI8 447 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 IQUBQ8NA54 791 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 CCDC148Q8NFR7 591 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 TTF2Q9UNY4 1162 aaKnown RBP18.16■□□□□ 0.5
SCARB1-202ENST00000339570 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
SCARB1-202ENST00000339570 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 RNF41Q9H4P4 317 aaPredicted RBP18.16■□□□□ 0.5
SCARB1-202ENST00000339570 AGPAT5Q9NUQ2 364 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 RNF40O75150 1001 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 ARHGAP25P42331 645 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 TCP11X2Q5H9J9 407 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 CDKAL1Q5VV42 579 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 KRT26Q7Z3Y9 468 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 EXOC4Q96A65 974 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 UBXN6Q9BZV1 441 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 ABCC12Q96J65 1359 aa18.16■□□□□ 0.5
SCARB1-202ENST00000339570 TULP2O00295 520 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 ATP8B1O43520 1251 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 NDUFA10O95299 355 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 IL17AQ16552 155 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 TMTC1Q8IUR5 882 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 SRBD1Q8N5C6 995 aaKnown RBP18.15■□□□□ 0.5
SCARB1-202ENST00000339570 CTCFLQ8NI51 663 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-202ENST00000339570 GOLGA5Q8TBA6 731 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 EHD2Q9NZN4 543 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 LUC7L2Q9Y383 392 aaKnown RBP18.15■□□□□ 0.5
SCARB1-202ENST00000339570 MAP2K7O14733 419 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
SCARB1-202ENST00000339570 SLC7A5Q01650 507 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 CCDC178Q5BJE1 867 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 EHD4Q9H223 541 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 NKRFO15226 690 aaKnown RBP eCLIP18.15■□□□□ 0.55e-7■□□□□ 9.1
SCARB1-202ENST00000339570 RPN1P04843 607 aaKnown RBP18.15■□□□□ 0.5
SCARB1-202ENST00000339570 CHRNDQ07001 517 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 GSDMAQ96QA5 445 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 TFCP2L1Q9NZI6 479 aa18.15■□□□□ 0.5
SCARB1-202ENST00000339570 C4AP0C0L4 1744 aa18.14■□□□□ 0.5
SCARB1-202ENST00000339570 C4BP0C0L5 1744 aa18.14■□□□□ 0.5
SCARB1-202ENST00000339570 SPATA31A3Q5VYP0 1347 aa18.14■□□□□ 0.49
SCARB1-202ENST00000339570 MYO1BO43795 1136 aa18.14■□□□□ 0.49
SCARB1-202ENST00000339570 NAP1L1P55209 391 aaKnown RBP18.14■□□□□ 0.49
SCARB1-202ENST00000339570 RNASE9P60153 205 aaKnown RBP18.14■□□□□ 0.49
SCARB1-202ENST00000339570 CTR9Q6PD62 1173 aa18.14■□□□□ 0.49
SCARB1-202ENST00000339570 ZNF579Q8NAF0 562 aaKnown RBP18.14■□□□□ 0.49
SCARB1-202ENST00000339570 PHF20Q9BVI0 1012 aa18.14■□□□□ 0.49
SCARB1-202ENST00000339570 LACRTQ9GZZ8 138 aa18.14■□□□□ 0.49
SCARB1-202ENST00000339570 FBXO3Q9UK99 471 aa18.14■□□□□ 0.49
SCARB1-202ENST00000339570 REXO2Q9Y3B8 237 aaKnown RBP18.14■□□□□ 0.49
SCARB1-202ENST00000339570 MYBL2P10244 700 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 NIP7Q9Y221 180 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 GOLGA8HP0CJ92 632 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 RNF26Q9BY78 433 aaPredicted RBP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 VAT1LQ9HCJ6 419 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 PLEKP08567 350 aaPredicted RBP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 PTPROQ16827 1216 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 SRLQ86TD4 932 aa18.13■□□□□ 0.49
SCARB1-202ENST00000339570 MAGEC2Q9UBF1 373 aaPredicted RBP18.13■□□□□ 0.49
SCARB1-202ENST00000339570 RCCD1A6NED2 376 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 PBX1P40424 430 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 INF2Q27J81 1249 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 SPATA20Q8TB22 786 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 CRACR2AQ9BSW2 395 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 IPO7O95373 1038 aaKnown RBP18.12■□□□□ 0.49
SCARB1-202ENST00000339570 IDEP14735 1019 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 ALX1Q15699 326 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 CCDC96Q2M329 555 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
SCARB1-202ENST00000339570 JAKMIP2Q96AA8 810 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 PLA2G12BQ9BX93 195 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
SCARB1-202ENST00000339570 KCNA4P22459 653 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 MTIF2P46199 727 aaKnown RBP18.11■□□□□ 0.49
SCARB1-202ENST00000339570 SAR1BQ9Y6B6 198 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-202ENST00000339570 FGFR2P21802 821 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 SEC23AQ15436 765 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 HEATR3Q7Z4Q2 680 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 KLRK1P26718 216 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 GGCXP38435 758 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 UBA7P41226 1012 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 OR8K1Q8NGG5 319 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
SCARB1-202ENST00000339570 TBC1D8BQ0IIM8 1120 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 STAG2Q8N3U4 1231 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 FERMT2Q96AC1 680 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 FAM207AQ9NSI2 230 aaPredicted RBP18.1■□□□□ 0.49
SCARB1-202ENST00000339570 TJP1Q07157 1748 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms