RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 GSTO1P78417 241 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 PICALMQ13492 652 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 IQUBQ8NA54 791 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 ESR2Q92731 530 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 ATP8A2Q9NTI2 1148 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 CCDC88AQ3V6T2 1871 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 TNKSO95271 1327 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 ERICH2A1L162 156 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 GOLGA8AA7E2F4 631 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 LDHCP07864 332 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 STYK1Q6J9G0 422 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 DUOX1Q9NRD9 1551 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 KIF28PB7ZC32 967 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 MYO1CO00159 1063 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 DPEP1P16444 411 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 SYKP43405 635 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 RPAINQ86UA6 219 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 JMYQ8N9B5 988 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 DAGLAQ9Y4D2 1042 aa11.72□□□□□ -0.53
APOBEC3F-201ENST00000308521 WDHD1O75717 1129 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 ATP1A3P13637 1013 aa11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 SART3Q15020 963 aaKnown RBP11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 C7orf43Q8WVR3 580 aa11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.53
APOBEC3F-201ENST00000308521 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 URI1O94763 535 aaPredicted RBP11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 SERPINC1P01008 464 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 LIFRP42702 1097 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 PPP4CP60510 307 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 TMEM139Q8IV31 216 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 GPR161Q8N6U8 529 aaKnown RBP11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 DPF2Q92785 391 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 MTMR7Q9Y216 660 aa11.71□□□□□ -0.54
APOBEC3F-201ENST00000308521 FAM205AQ6ZU69 1335 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 hCG_1642624A0A1W2PR95 340 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 ECE2O60344 883 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 RHBDL3P58872 404 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 TBX2Q13207 712 aaPredicted RBP11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 C12orf60Q5U649 245 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 EYA3Q99504 573 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 CARD6Q9BX69 1037 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 TSPY2A6NKD2 308 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 FANCGO15287 622 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 CAPN15O75808 1086 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 CACNB3P54284 484 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 SEC23AQ15436 765 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 CFAP100Q494V2 611 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 RESP18Q5W5W9 173 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 GOLGA5Q8TBA6 731 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 DONSONQ9NYP3 566 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 PPP2R2CQ9Y2T4 447 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 LTBP1Q14766 1721 aa11.7□□□□□ -0.54
APOBEC3F-201ENST00000308521 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 KCNA3P22001 575 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 TFAP4Q01664 338 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 PTPAQ15257 358 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 CCDC91Q7Z6B0 441 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 MKNK2Q9HBH9 465 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 LRRC37AA6NMS7 1700 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 STX10O60499 249 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 PDE4BQ07343 736 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 NTRK3Q16288 839 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 SHC4Q6S5L8 630 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 RSRC2Q7L4I2 434 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms