RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FAM205AQ6ZU69 1335 aa25■■□□□ 1.59
TPM4-201ENST00000300933 KIF5BP33176 963 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 POSTNQ15063 836 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 BBXQ8WY36 941 aaPredicted RBP24.99■■□□□ 1.59
TPM4-201ENST00000300933 VAT1LQ9HCJ6 419 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 CEP131Q9UPN4 1083 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 LAMB1P07942 1786 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 EIF6P56537 245 aaKnown RBP24.99■■□□□ 1.59
TPM4-201ENST00000300933 SYMPKQ92797 1274 aaKnown RBP24.99■■□□□ 1.59
TPM4-201ENST00000300933 SRGNP10124 158 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 PTPN14Q15678 1187 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 USP17L2Q6R6M4 530 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 DAGLAQ9Y4D2 1042 aa24.99■■□□□ 1.59
TPM4-201ENST00000300933 SKILP12757 684 aa24.98■■□□□ 1.59
TPM4-201ENST00000300933 HEATR3Q7Z4Q2 680 aa24.98■■□□□ 1.59
TPM4-201ENST00000300933 HOMER1Q86YM7 354 aa24.98■■□□□ 1.59
TPM4-201ENST00000300933 DPF2Q92785 391 aa24.98■■□□□ 1.59
TPM4-201ENST00000300933 ZNF622Q969S3 477 aaKnown RBP eCLIP24.98■■□□□ 1.594e-7■■□□□ 11.9
TPM4-201ENST00000300933 ZC3H12CQ9C0D7 883 aaKnown RBP24.98■■□□□ 1.59
TPM4-201ENST00000300933 TRMT44Q8IYL2 757 aaKnown RBP24.98■■□□□ 1.59
TPM4-201ENST00000300933 FANCLQ9NW38 375 aa24.98■■□□□ 1.59
TPM4-201ENST00000300933 MAN1B1Q9UKM7 699 aa24.98■■□□□ 1.59
TPM4-201ENST00000300933 MAST2Q6P0Q8 1798 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 SP8Q8IXZ3 490 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 ATP6V0A2Q9Y487 856 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 ACTN4O43707 911 aaKnown RBP24.97■■□□□ 1.59
TPM4-201ENST00000300933 CDC25BP30305 580 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 ELF2Q15723 593 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 TMC6Q7Z403 805 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 KRT222Q8N1A0 295 aa24.97■■□□□ 1.59
TPM4-201ENST00000300933 TERF2Q15554 542 aa24.96■■□□□ 1.59
TPM4-201ENST00000300933 CEP95Q96GE4 821 aa24.96■■□□□ 1.59
TPM4-201ENST00000300933 BPIFA3Q9BQP9 254 aa24.96■■□□□ 1.59
TPM4-201ENST00000300933 KLRG2A4D1S0 409 aaPredicted RBP24.96■■□□□ 1.59
TPM4-201ENST00000300933 ZNF397Q8NF99 534 aaPredicted RBP24.96■■□□□ 1.59
TPM4-201ENST00000300933 ST7Q9NRC1 585 aa24.96■■□□□ 1.59
TPM4-201ENST00000300933 TTF2Q9UNY4 1162 aaKnown RBP24.96■■□□□ 1.59
TPM4-201ENST00000300933 IL17AQ16552 155 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 WWC2Q6AWC2 1192 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 DBNDD1Q9H9R9 158 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 DDX4Q9NQI0 724 aaKnown RBP24.95■■□□□ 1.58
TPM4-201ENST00000300933 PCDHAC2Q9Y5I4 1007 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 ERICH4A6NGS2 130 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 FANCCQ00597 558 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 GRM4Q14833 912 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 FBXO38Q6PIJ6 1188 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 DPP8Q6V1X1 898 aaPredicted RBP24.95■■□□□ 1.58
TPM4-201ENST00000300933 UBA5Q9GZZ9 404 aa24.95■■□□□ 1.58
TPM4-201ENST00000300933 KLRF2D3W0D1 207 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 FMR1Q06787 632 aaKnown RBP eCLIP24.94■■□□□ 1.58
TPM4-201ENST00000300933 TAF3Q5VWG9 929 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
TPM4-201ENST00000300933 C16orf86Q6ZW13 317 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 ZNF579Q8NAF0 562 aaKnown RBP24.94■■□□□ 1.58
TPM4-201ENST00000300933 COBLO75128 1261 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 BLIDQ8IZY5 108 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 NLGN1Q8N2Q7 840 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 SMARCE1Q969G3 411 aa24.94■■□□□ 1.58
TPM4-201ENST00000300933 G3V3G9 751 aa24.93■■□□□ 1.58
TPM4-201ENST00000300933 DCAF8Q5TAQ9 597 aa24.93■■□□□ 1.58
TPM4-201ENST00000300933 SMYD4Q8IYR2 804 aaPredicted RBP24.93■■□□□ 1.58
TPM4-201ENST00000300933 MYL5Q02045 173 aa24.93■■□□□ 1.58
TPM4-201ENST00000300933 GOLGA8FQ08AF8 430 aa24.93■■□□□ 1.58
TPM4-201ENST00000300933 GOLGA8DPQ0D2H9 430 aa24.93■■□□□ 1.58
TPM4-201ENST00000300933 ROBO3Q96MS0 1386 aa24.93■■□□□ 1.58
TPM4-201ENST00000300933 SERPINC1P01008 464 aa24.92■■□□□ 1.58
TPM4-201ENST00000300933 CACNB3P54284 484 aa24.92■■□□□ 1.58
TPM4-201ENST00000300933 TBC1D22AQ8WUA7 517 aa24.92■■□□□ 1.58
TPM4-201ENST00000300933 AKT1S1Q96B36 256 aa24.92■■□□□ 1.58
TPM4-201ENST00000300933 TMED8Q6PL24 325 aaPredicted RBP24.92■■□□□ 1.58
TPM4-201ENST00000300933 FRMPD2Q68DX3 1309 aaPredicted RBP24.92■■□□□ 1.58
TPM4-201ENST00000300933 SNED1Q8TER0 1413 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 KLHL10Q6JEL2 608 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 NYAP1Q6ZVC0 841 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 ANKS1AQ92625 1134 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 BLZF1Q9H2G9 400 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 USP17L5A8MUK1 530 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 TMEM232C9JQI7 657 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 TPM4P67936 248 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 INF2Q27J81 1249 aa24.91■■□□□ 1.58
TPM4-201ENST00000300933 LRRC47Q8N1G4 583 aaKnown RBP24.91■■□□□ 1.58
TPM4-201ENST00000300933 NAV1Q8NEY1 1877 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 GAKO14976 1311 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 PALM3A6NDB9 673 aaPredicted RBP24.9■■□□□ 1.58
TPM4-201ENST00000300933 ATP2C1P98194 919 aaPredicted RBP24.9■■□□□ 1.58
TPM4-201ENST00000300933 MED15Q96RN5 788 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 USP40Q9NVE5 1235 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 UBASH3AP57075 661 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 CFAP100Q494V2 611 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 FAM163AQ96GL9 167 aaPredicted RBP24.9■■□□□ 1.58
TPM4-201ENST00000300933 COA1Q9GZY4 146 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 HOOK1Q9UJC3 728 aaKnown RBP24.9■■□□□ 1.58
TPM4-201ENST00000300933 PARP3Q9Y6F1 533 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 CDK5RAP2Q96SN8 1893 aa24.9■■□□□ 1.58
TPM4-201ENST00000300933 IKBKBO14920 756 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 NPR1P16066 1061 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 PLCG2P16885 1265 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 STX17P56962 302 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 NEDD1Q8NHV4 660 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms