RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 LAMA2P24043 3122 aaKnown RBP11.32□□□□□ -0.6
CNOT9-202ENST00000295701 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 SHMT1P34896 483 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 RGS2P41220 211 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 MAP2K5Q13163 448 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 PDE3AQ14432 1141 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
CNOT9-202ENST00000295701 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 CATSPERGQ6ZRH7 1159 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 CCAR1Q8IX12 1150 aaKnown RBP11.31□□□□□ -0.6
CNOT9-202ENST00000295701 NPLOC4Q8TAT6 608 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 C12orf42Q96LP6 360 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 FEZ1Q99689 392 aa11.31□□□□□ -0.6
CNOT9-202ENST00000295701 COL6A1P12109 1028 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 VCAM1P19320 739 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 SEPT2Q15019 361 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 ABCB5Q2M3G0 1257 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 AACSQ86V21 672 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 FTSJ3Q8IY81 847 aaKnown RBP11.3□□□□□ -0.6
CNOT9-202ENST00000295701 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
CNOT9-202ENST00000295701 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 IL1RAPL2Q9NP60 686 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 RLFQ13129 1914 aa11.3□□□□□ -0.6
CNOT9-202ENST00000295701 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 BAZ2AQ9UIF9 1905 aaKnown RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 DLL1O00548 723 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 CYP2D6P10635 497 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 MDM2Q00987 491 aaPredicted RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 TRMT44Q8IYL2 757 aaKnown RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 DEFB123Q8N688 67 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 PANK1Q8TE04 598 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 GTF3C2Q8WUA4 911 aaPredicted RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 APBA2Q99767 749 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 RIOK1Q9BRS2 568 aaKnown RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 UBE2OQ9C0C9 1292 aaKnown RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
CNOT9-202ENST00000295701 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
CNOT9-202ENST00000295701 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 APBB1O00213 710 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 POLR3DP05423 398 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-202ENST00000295701 CYP2C19P33261 490 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
CNOT9-202ENST00000295701 GABPAQ06546 454 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 MAP3K12Q12852 859 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 TTC6Q86TZ1 520 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 SLC44A5Q8NCS7 719 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 SENP6Q9GZR1 1112 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-202ENST00000295701 EHD4Q9H223 541 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-202ENST00000295701 MYH8P13535 1937 aa11.28□□□□□ -0.6
CNOT9-202ENST00000295701 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 SLC15A5A6NIM6 579 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 CHGBP05060 677 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 CNGA1P29973 690 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 USP14P54578 494 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 LRIT3Q3SXY7 679 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 MFSD14CQ5VZR4 134 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 ANO1Q5XXA6 986 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 DYNLL2Q96FJ2 89 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 MCM9Q9NXL9 1143 aa11.27□□□□□ -0.61
CNOT9-202ENST00000295701 TCRBV5S4A2TA0A5A2 114 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 SMAPO00193 183 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 GOLIM4O00461 696 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
CNOT9-202ENST00000295701 PRKAB2O43741 272 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 IGSF3O75054 1194 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 PDE6AP16499 860 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 CCNA1P78396 465 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 GRB14Q14449 540 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 PRAMEF19Q5SWL8 479 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 LBX2Q6XYB7 198 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 LCORLQ8N3X6 602 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 RHPN1Q8TCX5 695 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 MOV10L1Q9BXT6 1211 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms