RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 KRT39Q6A163 491 aa16.32■□□□□ 0.2
SEC16A-202ENST00000290037 PDE4DQ08499 809 aa16.32■□□□□ 0.2
SEC16A-202ENST00000290037 MUM1L1Q5H9M0 696 aa16.32■□□□□ 0.2
SEC16A-202ENST00000290037 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
SEC16A-202ENST00000290037 RFX1P22670 979 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 GPTP24298 496 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 KPNA2P52292 529 aaKnown RBP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 CASQ2O14958 399 aaPredicted RBP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 TROVE2P10155 538 aaKnown RBP eCLIP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 PTGS1P23219 599 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 DCAF15Q66K64 600 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 NR1H3Q13133 447 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 SPATA5Q8NB90 893 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
SEC16A-202ENST00000290037 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
SEC16A-202ENST00000290037 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 STAT1P42224 750 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 CCT6BQ92526 530 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 TTC39CQ8N584 583 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 TRIM35Q9UPQ4 493 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 COL4A3BPQ9Y5P4 624 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 VWA3AA6NCI4 1184 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
SEC16A-202ENST00000290037 SURF1Q15526 300 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 MPNDQ8N594 471 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 MIPOL1Q8TD10 442 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 MYSM1Q5VVJ2 828 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 PPP4R1Q8TF05 950 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 TDRD7Q8NHU6 1098 aaKnown RBP16.3■□□□□ 0.2
SEC16A-202ENST00000290037 CARD14Q9BXL6 1004 aa16.3■□□□□ 0.2
SEC16A-202ENST00000290037 ALDH8A1Q9H2A2 487 aaPredicted RBP16.3■□□□□ 0.2
SEC16A-202ENST00000290037 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 PEX26Q7Z412 305 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 LMBRD1Q9NUN5 540 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 MID2Q9UJV3 735 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 MBD4O95243 580 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 ITGA6P23229 1130 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 SPATA1Q5VX52 437 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 E7EVH7 732 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 ZWINTO95229 277 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 PLCB3Q01970 1234 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 CTNND2Q9UQB3 1225 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
SEC16A-202ENST00000290037 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
SEC16A-202ENST00000290037 GDPD2Q9HCC8 539 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 ALS2CLQ60I27 953 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
SEC16A-202ENST00000290037 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 NFE2L3Q9Y4A8 694 aa16.29■□□□□ 0.2
SEC16A-202ENST00000290037 KCNJ6P48051 423 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 MRPL11Q9Y3B7 192 aaKnown RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 XPOTO43592 962 aaKnown RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 UBLCP1Q8WVY7 318 aaPredicted RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 POLR2DO15514 142 aaKnown RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 MCUR1Q96AQ8 359 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 USP6P35125 1406 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 DNAJC8O75937 253 aaPredicted RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 DRC3Q9H069 523 aa16.28■□□□□ 0.2
SEC16A-202ENST00000290037 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
SEC16A-202ENST00000290037 CCDC151A5D8V7 595 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 CUL1Q13616 776 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 PPP1R18Q6NYC8 613 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 IQGAP1P46940 1657 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 ZBED4O75132 1171 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 PBKQ96KB5 322 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 FAM8A1Q9UBU6 413 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 SYT10Q6XYQ8 523 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
SEC16A-202ENST00000290037 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
SEC16A-202ENST00000290037 E9PCH4 1651 aa16.27■□□□□ 0.19
SEC16A-202ENST00000290037 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.19
SEC16A-202ENST00000290037 CCDC89Q8N998 374 aa16.27■□□□□ 0.19
SEC16A-202ENST00000290037 KIFC2Q96AC6 838 aa16.27■□□□□ 0.19
SEC16A-202ENST00000290037 CARD10Q9BWT7 1032 aa16.27■□□□□ 0.19
SEC16A-202ENST00000290037 CTSWP56202 376 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms