RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 GOLGA8DPQ0D2H9 430 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 TTC38Q5R3I4 469 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 MCM9Q9NXL9 1143 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 TNRC6CQ9HCJ0 1690 aaKnown RBP25.62■■□□□ 1.69
MCF2L-201ENST00000261963 TOP1P11387 765 aaKnown RBP25.62■■□□□ 1.69
MCF2L-201ENST00000261963 SCG2P13521 617 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 FAM182BQ5T319 152 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 CC2D1AQ6P1N0 951 aaPredicted RBP25.62■■□□□ 1.69
MCF2L-201ENST00000261963 TRIM65Q6PJ69 517 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 DZIP1Q86YF9 867 aaKnown RBP25.62■■□□□ 1.69
MCF2L-201ENST00000261963 TSPY2A6NKD2 308 aa25.61■■□□□ 1.69
MCF2L-201ENST00000261963 ADAMTS3O15072 1205 aa25.61■■□□□ 1.69
MCF2L-201ENST00000261963 SLC4A8Q2Y0W8 1093 aa25.61■■□□□ 1.69
MCF2L-201ENST00000261963 MYO1CO00159 1063 aa25.6■■□□□ 1.69
MCF2L-201ENST00000261963 PLCD1P51178 756 aa25.6■■□□□ 1.69
MCF2L-201ENST00000261963 ATP2C1P98194 919 aaPredicted RBP25.6■■□□□ 1.69
MCF2L-201ENST00000261963 TBX2Q13207 712 aaPredicted RBP25.6■■□□□ 1.69
MCF2L-201ENST00000261963 PFKFB3Q16875 520 aaPredicted RBP25.6■■□□□ 1.69
MCF2L-201ENST00000261963 SPTY2D1Q68D10 685 aaPredicted RBP25.6■■□□□ 1.69
MCF2L-201ENST00000261963 PAGE5Q96GU1 130 aa25.6■■□□□ 1.69
MCF2L-201ENST00000261963 TOM1O60784 492 aa25.59■■□□□ 1.69
MCF2L-201ENST00000261963 CASP1P29466 404 aa25.59■■□□□ 1.69
MCF2L-201ENST00000261963 AFMP43652 599 aa25.59■■□□□ 1.69
MCF2L-201ENST00000261963 IRX3P78415 501 aaPredicted RBP25.59■■□□□ 1.69
MCF2L-201ENST00000261963 PTGDRQ13258 359 aa25.59■■□□□ 1.69
MCF2L-201ENST00000261963 C12orf60Q5U649 245 aa25.59■■□□□ 1.69
MCF2L-201ENST00000261963 SAMSN1Q9NSI8 373 aaKnown RBP25.59■■□□□ 1.69
MCF2L-201ENST00000261963 PARP3Q9Y6F1 533 aa25.59■■□□□ 1.69
MCF2L-201ENST00000261963 TMEM139Q8IV31 216 aa25.58■■□□□ 1.69
MCF2L-201ENST00000261963 GPR161Q8N6U8 529 aaKnown RBP25.58■■□□□ 1.69
MCF2L-201ENST00000261963 GOLGA5Q8TBA6 731 aa25.58■■□□□ 1.69
MCF2L-201ENST00000261963 IL17RBQ9NRM6 502 aa25.58■■□□□ 1.69
MCF2L-201ENST00000261963 ERCC5P28715 1186 aaPredicted RBP25.58■■□□□ 1.69
MCF2L-201ENST00000261963 NLRP5P59047 1200 aa25.58■■□□□ 1.69
MCF2L-201ENST00000261963 GRIK5Q16478 980 aa25.58■■□□□ 1.69
MCF2L-201ENST00000261963 C10orf67Q8IYJ2 551 aa25.58■■□□□ 1.69
MCF2L-201ENST00000261963 CCDC88AQ3V6T2 1871 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 DPYDQ12882 1025 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 PIK3AP1Q6ZUJ8 805 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
MCF2L-201ENST00000261963 CCDC34Q96HJ3 373 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 VWA3AA6NCI4 1184 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 TFAP4Q01664 338 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 NFIXQ14938 502 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 SH3RF3Q8TEJ3 882 aaPredicted RBP25.57■■□□□ 1.68
MCF2L-201ENST00000261963 DYNLL2Q96FJ2 89 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 ARFGAP3Q9NP61 516 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 ANKIB1Q9P2G1 1089 aa25.57■■□□□ 1.68
MCF2L-201ENST00000261963 LDHBP07195 334 aaKnown RBP25.56■■□□□ 1.68
MCF2L-201ENST00000261963 CD44P16070 742 aaKnown RBP25.56■■□□□ 1.68
MCF2L-201ENST00000261963 GRAPQ13588 217 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 GRAPLQ8TC17 118 aaPredicted RBP25.56■■□□□ 1.68
MCF2L-201ENST00000261963 EXOC4Q96A65 974 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 PSD3Q9NYI0 1048 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 NHSQ6T4R5 1651 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 TRAPPC10P48553 1259 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 WDR66Q8TBY9 1149 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 EPC1Q9H2F5 836 aa25.56■■□□□ 1.68
MCF2L-201ENST00000261963 FANCGO15287 622 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 KIF5BP33176 963 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 CUL4BQ13620 913 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 DIXDC1Q155Q3 683 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 IL17AQ16552 155 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 REXO1L1PQ8IX06 675 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 LCMT1Q9UIC8 334 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 LEMD3Q9Y2U8 911 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 TRIM66O15016 1216 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 E2F4Q16254 413 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 DGKHQ86XP1 1220 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 KAT14Q9H8E8 782 aa25.55■■□□□ 1.68
MCF2L-201ENST00000261963 ZSCAN12O43309 604 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 CASQ1P31415 396 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 USP5P45974 858 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 STAG2Q8N3U4 1231 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 ANKS1AQ92625 1134 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 GPR101Q96P66 508 aaPredicted RBP25.54■■□□□ 1.68
MCF2L-201ENST00000261963 ROBO3Q96MS0 1386 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 RFC4P35249 363 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 CT47A1Q5JQC4 288 aaPredicted RBP25.54■■□□□ 1.68
MCF2L-201ENST00000261963 SPECC1LQ69YQ0 1117 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 APTXQ7Z2E3 356 aaKnown RBP25.54■■□□□ 1.68
MCF2L-201ENST00000261963 PNMA1Q8ND90 353 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 SBF2Q86WG5 1849 aa25.54■■□□□ 1.68
MCF2L-201ENST00000261963 NR1I3Q14994 352 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 FCHSD1Q86WN1 690 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 TC2NQ8N9U0 490 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 GSDMAQ96QA5 445 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 ADAM21Q9UKJ8 722 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 XDHP47989 1333 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 FAM205AQ6ZU69 1335 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 MCM7P33993 719 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 SLC35G1Q2M3R5 365 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 SRLQ86TD4 932 aa25.53■■□□□ 1.68
MCF2L-201ENST00000261963 THSD7AQ9UPZ6 1657 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 A0A1B0GTH6 734 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 NOP2P46087 812 aaKnown RBP25.52■■□□□ 1.68
MCF2L-201ENST00000261963 LMAN1P49257 510 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 TRAPPC3LQ5T215 181 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 GPKOWQ92917 476 aaPredicted RBP eCLIP25.52■■□□□ 1.68
MCF2L-201ENST00000261963 FUT8Q9BYC5 575 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms