RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Myh8P13542 1937 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Lamb1P02469 1786 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 4932429P05RikA2ADI4 785 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 A430078G23RikE9Q7Y4 484 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Slc39a2G3X943 309 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Myo1aO88329 1043 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Fam178bQ24JP3 464 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 PRAG1Q571I4 1179 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Cnnm4Q69ZF7 771 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Best3Q6H1V1 669 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Lzts2Q91YU6 671 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Mfap3Q922T2 349 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Akap8Q9DBR0 687 aaKnown RBP17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Trmt112Q9DCG9 125 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Tsc2Q61037 1814 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Togaram1Q6A070 1776 aaKnown RBP17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Kifc2O08672 792 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Mboat4P0C7A3 435 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Bag1Q60739 355 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Nab2Q61127 525 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Dlg1Q811D0 905 aaKnown RBP17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Mmtag2Q99LX5 260 aaKnown RBP17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Cfap45Q9D9U9 551 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Chaf1aQ9QWF0 911 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Gm30191A0A0U1RNT7 187 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Zfp853A0A1D5RM95 733 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pabpc1lA2A5N3 607 aaKnown RBP17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Prdm11A2AGX3 565 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Fam186bD3Z420 943 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Tpm1P58771 284 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Madcam1Q61826 405 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Ovgp1Q62010 721 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Rbm12b2Q66JV4 834 aaKnown RBP17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Fermt2Q8CIB5 680 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Creld2Q9CYA0 350 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Arpp21Q9DCB4 807 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 RabggtaQ9JHK4 567 aa17.6■□□□□ 0.41
Vcan-201ENSMUST00000109543 Arid4aF8VPQ2 1261 aaKnown RBP17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Vmn2r68L7N2B3 851 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 MthfslL7N466 203 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 EgfrQ01279 1210 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 CtcfQ61164 736 aaKnown RBP17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pim2Q62070 370 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Grm4Q68EF4 912 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Necab1Q8BG18 352 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Rasgrp4Q8BTM9 673 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pcdha12Q91Y18 950 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 SelenooQ9DBC0 667 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Itga2bQ9QUM0 1033 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Sox5P35710 763 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Arhgef2Q60875 985 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Gpbp1Q6NXH3 473 aaKnown RBP17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Msl1Q6PDM1 616 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Ppp2r2cQ8BG02 447 aa17.59■□□□□ 0.41
Vcan-201ENSMUST00000109543 Frmpd4A2AFR3 1320 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Ecm29Q6PDI5 1840 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 UncxO08934 530 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 MyrflQ3UN70 904 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Zdhhc14Q8BQQ1 489 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Txndc5Q91W90 417 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pcdhb5Q91XZ5 792 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pcdha7Q91Y13 937 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Txnrd3Q99MD6 652 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Uchl5Q9WUP7 329 aa17.58■□□□□ 0.41
Vcan-201ENSMUST00000109543 Nup188Q6ZQH8 1759 aa17.58■□□□□ 0.4
Vcan-201ENSMUST00000109543 Krt78E9Q0F0 1068 aa17.58■□□□□ 0.4
Vcan-201ENSMUST00000109543 Rhpn1Q61085 643 aa17.58■□□□□ 0.4
Vcan-201ENSMUST00000109543 Etf1Q8BWY3 437 aaKnown RBP17.58■□□□□ 0.4
Vcan-201ENSMUST00000109543 Hs2st1Q8R3H7 356 aa17.58■□□□□ 0.4
Vcan-201ENSMUST00000109543 Q91WD4 421 aa17.58■□□□□ 0.4
Vcan-201ENSMUST00000109543 Eif6O55135 245 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Pak1O88643 545 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 LdhaP06151 332 aaKnown RBP17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Eef2P58252 858 aaKnown RBP17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Taf3Q5HZG4 932 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Cnga2Q62398 664 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Adam6bQ6IMH7 756 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Aggf1Q7TN31 711 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 KhnynQ80U38 671 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Rasal3Q8C2K5 1041 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 NelfbQ8C4Y3 580 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Nek9Q8K1R7 984 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 BaatQ91X34 420 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Pex3Q9QXY9 372 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Klrc1Q9Z202 244 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ulk4Q3V129 1303 aa17.57■□□□□ 0.4
Vcan-201ENSMUST00000109543 Nr1i2O54915 431 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Dync1i1O88485 628 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Tbc1d2bQ3U0J8 965 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Fam161bQ8CB59 589 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Apol10aQ8CCA5 318 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 CenpqQ9CPQ5 267 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 A0A1W2P6Q8 802 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gm9048A0A1W2P7H4 802 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 A0A1W2P7Z8 802 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gm9046A0A1W2P855 802 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Adam7O35227 789 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Vars2Q3U2A8 1060 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Fhdc1Q3ULZ2 1149 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Lca5Q80ST9 704 aa17.56■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 74.8 ms