RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Stard7Q8R1R3 373 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Slc22a19Q8VCA0 551 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tpgs1Q99MS8 303 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Slc6a19Q9D687 634 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Doc2gQ9ESN1 387 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 PplQ9R269 1755 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Dhx9O70133 1380 aaKnown RBP10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Myo3aQ8K3H5 1613 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Krt13P08730 437 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Mc3rP33033 323 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pax7P47239 503 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Polr2fP61219 127 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Cct5P80316 541 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Rnf38Q8BI21 518 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Clasp2Q8BRT1 1286 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ablim1Q8K4G5 861 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 HibchQ8QZS1 385 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Maf1Q9D0U6 258 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Cse1lQ9ERK4 971 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 SpxD3Z752 116 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Wscd2D4PHA7 571 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Lmnb1P14733 588 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tnfrsf9P20334 256 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Limk1P53668 647 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Washc4Q3UMB9 1173 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 DeptorQ570Y9 409 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 ArhgdibQ61599 200 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Krt32Q62168 407 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Nemp1Q6ZQE4 437 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pramel6Q810Y9 485 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Brd3Q8K2F0 726 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Appl2Q8K3G9 662 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ccar2Q8VDP4 922 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ddx27Q921N6 760 aaKnown RBP10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Abca8aQ8K442 1620 aa10.3□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tnfrsf26P83626 204 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Zkscan1Q8BGS3 561 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tdrd7Q8K1H1 1086 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Olfr808Q8VGI8 312 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gfod2Q9CYH5 385 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Chit1Q9D7Q1 464 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 MajinQ9D992 256 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Upf1Q9EPU0 1124 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Scyl1Q9EQC5 806 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pin1Q9QUR7 165 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Golga5Q9QYE6 729 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Coro1bQ9WUM3 484 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Setd1aE9PYH6 1716 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Washc2Q6PGL7 1334 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tex13aA2AFS9 377 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Elmsan1E9Q2I4 1089 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Cpsf2O35218 782 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Clcn1Q64347 994 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ctnna3Q65CL1 895 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Znf579Q80VM4 562 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 DglucyQ8BH86 617 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Cdca8Q8BHX3 289 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Polr2bQ8CFI7 1174 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Rbm33Q9CXK9 1231 aaKnown RBP10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Slc34a2Q9DBP0 697 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Inpp5dQ9ES52 1191 aa10.29□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm9992B2RWK3 458 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Casp12O08736 419 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Rc3h2P0C090 1187 aaKnown RBP10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 PolP11369 1281 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Sox5P35710 763 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tbx3P70324 741 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 ItkQ03526 625 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Brinp3Q499E0 766 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Klra6Q60653 266 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Trim28Q62318 834 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Unc93aQ710D3 458 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 PygbQ8CI94 843 aaKnown RBP10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Mta3Q924K8 591 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ggt7Q99JP7 662 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Rad50P70388 1312 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ttc41Q692V3 1318 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Thsd7aQ69ZU6 1645 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Mbd5B1AYB6 1498 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tmem116A0A0G2JGD3 401 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Prl3d3A0A0M6L0J6 224 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ildr2B5TVM2 661 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Prl3d2F6R3P9 224 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Zc3h12bG3X9I7 835 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Fgl2P12804 432 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 G3bp1P97855 465 aaKnown RBP10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pgap2Q3TQR0 254 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 CtcfQ61164 736 aaKnown RBP10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Epb41l5Q8BGS1 731 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ift22Q9DAI2 185 aa10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 PhaxQ9JJT9 385 aaKnown RBP10.28□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm13102A2ASJ3 519 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Olfr376E9Q4M1 320 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm5152L7N200 190 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Dpf3P58269 378 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Kif20aP97329 887 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Nlrp4cQ3TKR3 982 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gramd2aQ3V3G7 320 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 PRAG1Q571I4 1179 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Iars2Q8BIJ6 1012 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 77.1 ms