RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	SPO16	P17122	198 aa		3.15	□□□□□ -1.91
BER1	YLR412W	STE50	P25344	346 aa		3.15	□□□□□ -1.91
BER1	YLR412W	LHS1	P36016	881 aa		3.15	□□□□□ -1.91
BER1	YLR412W	MRPL36	P36531	177 aa		3.15	□□□□□ -1.91
BER1	YLR412W	VRG4	P40107	337 aa		3.15	□□□□□ -1.91
BER1	YLR412W	PAP2	P53632	584 aa	Known RBP	3.15	□□□□□ -1.91
BER1	YLR412W	ESBP6	P53918	673 aa		3.15	□□□□□ -1.91
BER1	YLR412W	ASI1	P54074	624 aa		3.15	□□□□□ -1.91
BER1	YLR412W	CIA1	Q05583	330 aa		3.15	□□□□□ -1.91
BER1	YLR412W	ECI1	Q05871	280 aa		3.15	□□□□□ -1.91
BER1	YLR412W	GRS2	Q06817	618 aa		3.15	□□□□□ -1.91
BER1	YLR412W	NRT1	Q08485	598 aa		3.15	□□□□□ -1.91
BER1	YLR412W	PCD1	Q12524	340 aa		3.15	□□□□□ -1.91
BER1	YLR412W	MSM1	P22438	575 aa		3.14	□□□□□ -1.91
BER1	YLR412W	YCL049C	P25577	312 aa		3.14	□□□□□ -1.91
BER1	YLR412W	LEU5	P38702	357 aa		3.14	□□□□□ -1.91
BER1	YLR412W	NPR3	P38742	1146 aa		3.14	□□□□□ -1.91
BER1	YLR412W	MRX1	P40050	688 aa		3.14	□□□□□ -1.91
BER1	YLR412W	SAD1	P43589	448 aa		3.14	□□□□□ -1.91
BER1	YLR412W	COG1	P53079	417 aa		3.14	□□□□□ -1.91
BER1	YLR412W	ARC35	P53731	342 aa	Known RBP	3.14	□□□□□ -1.91
BER1	YLR412W	CSL4	P53859	292 aa	Predicted RBP	3.14	□□□□□ -1.91
BER1	YLR412W	BET4	Q00618	327 aa		3.14	□□□□□ -1.91
BER1	YLR412W	TMA16	Q08687	178 aa		3.14	□□□□□ -1.91
BER1	YLR412W	TKL1	P23254	680 aa	Known RBP	3.13	□□□□□ -1.91
BER1	YLR412W	SOF1	P33750	489 aa	Known RBP	3.13	□□□□□ -1.91
BER1	YLR412W	NTR2	P36118	322 aa	Predicted RBP	3.13	□□□□□ -1.91
BER1	YLR412W	IFA38	P38286	347 aa		3.13	□□□□□ -1.91
BER1	YLR412W	CCT4	P39078	528 aa	Known RBP	3.13	□□□□□ -1.91
BER1	YLR412W	YND1	P40009	630 aa		3.13	□□□□□ -1.91
BER1	YLR412W	SWP82	P43554	623 aa		3.13	□□□□□ -1.91
BER1	YLR412W	ASE1	P50275	885 aa		3.13	□□□□□ -1.91
BER1	YLR412W	UBX4	P54730	416 aa		3.13	□□□□□ -1.91
BER1	YLR412W	MRPL13	Q02204	264 aa		3.13	□□□□□ -1.91
BER1	YLR412W	UTP21	Q06078	939 aa	Predicted RBP	3.13	□□□□□ -1.91
BER1	YLR412W	GPN2	Q08726	347 aa	Predicted RBP	3.13	□□□□□ -1.91
BER1	YLR412W	TPK1	P06244	397 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-LR1	P0C2J4	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-F	P0CX61	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-GR2	P0CX62	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-C	P25383	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	AAP1	P37898	856 aa	Known RBP	3.12	□□□□□ -1.91
BER1	YLR412W	SEC31	P38968	1273 aa	Known RBP	3.12	□□□□□ -1.91
BER1	YLR412W	PSP1	P50896	841 aa	Known RBP	3.12	□□□□□ -1.91
BER1	YLR412W	YNL234W	P53857	426 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-DR2	Q03483	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	YMR254C	Q04838	102 aa		3.12	□□□□□ -1.91
BER1	YLR412W	FMP42	Q04991	504 aa		3.12	□□□□□ -1.91
BER1	YLR412W	YLR281C	Q05863	155 aa		3.12	□□□□□ -1.91
BER1	YLR412W	MCP2	Q06567	569 aa		3.12	□□□□□ -1.91
BER1	YLR412W	APL5	Q08951	932 aa	Known RBP	3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-B	Q12260	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-OR2	Q12293	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-DR1	Q12392	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-OR1	Q12439	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	YOR111W	Q99210	232 aa		3.12	□□□□□ -1.91
BER1	YLR412W	TY2A-DR3	Q99303	438 aa		3.12	□□□□□ -1.91
BER1	YLR412W	PGI1	P12709	554 aa	Known RBP	3.11	□□□□□ -1.91
BER1	YLR412W	UBC1	P21734	215 aa	Known RBP	3.11	□□□□□ -1.91
BER1	YLR412W	RKM3	P38222	552 aa		3.11	□□□□□ -1.91
BER1	YLR412W	ECM10	P39987	644 aa		3.11	□□□□□ -1.91
BER1	YLR412W	CTK2	P46962	323 aa		3.11	□□□□□ -1.91
BER1	YLR412W	IML2	P47031	731 aa		3.11	□□□□□ -1.91
BER1	YLR412W	YGL260W	P53056	76 aa		3.11	□□□□□ -1.91
BER1	YLR412W	SGF73	P53165	657 aa		3.11	□□□□□ -1.91
BER1	YLR412W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	RIP-Chip
BER1	YLR412W	FCP1	Q03254	732 aa		3.11	□□□□□ -1.91
BER1	YLR412W	RSM28	Q03430	361 aa		3.11	□□□□□ -1.91
BER1	YLR412W	BLS1	Q06071	122 aa		3.11	□□□□□ -1.91
BER1	YLR412W	MTF2	P10849	440 aa		3.1	□□□□□ -1.91
BER1	YLR412W	RAP1	P11938	827 aa		3.1	□□□□□ -1.91
BER1	YLR412W	HNM1	P19807	563 aa		3.1	□□□□□ -1.91
BER1	YLR412W	MGR1	P25573	417 aa		3.1	□□□□□ -1.91
BER1	YLR412W	DBF20	P32328	564 aa		3.1	□□□□□ -1.91
BER1	YLR412W	SAC1	P32368	623 aa	Known RBP	3.1	□□□□□ -1.91
BER1	YLR412W	SRB5	P32585	307 aa		3.1	□□□□□ -1.91
BER1	YLR412W	TFC3	P34111	1160 aa		3.1	□□□□□ -1.91
BER1	YLR412W	RTT107	P38850	1070 aa		3.1	□□□□□ -1.91
BER1	YLR412W	HXT9	P40885	567 aa		3.1	□□□□□ -1.91
BER1	YLR412W	YFR020W	P43600	232 aa		3.1	□□□□□ -1.91
BER1	YLR412W	YTP1	P53584	459 aa		3.1	□□□□□ -1.91
BER1	YLR412W	YNL181W	P53878	407 aa		3.1	□□□□□ -1.91
BER1	YLR412W	ARP10	Q04549	284 aa		3.1	□□□□□ -1.91
BER1	YLR412W	PPZ1	P26570	692 aa		3.09	□□□□□ -1.91
BER1	YLR412W	RAD16	P31244	790 aa		3.09	□□□□□ -1.91
BER1	YLR412W	PDR3	P33200	976 aa		3.09	□□□□□ -1.91
BER1	YLR412W	EFM2	P38347	419 aa		3.09	□□□□□ -1.91
BER1	YLR412W	RFC1	P38630	861 aa	Known RBP	3.09	□□□□□ -1.91
BER1	YLR412W	PFK26	P40433	827 aa	Known RBP	3.09	□□□□□ -1.91
BER1	YLR412W	IST3	P40565	148 aa	Predicted RBP	3.09	□□□□□ -1.91
BER1	YLR412W	SMK1	P41808	388 aa		3.09	□□□□□ -1.91
BER1	YLR412W	HOS2	P53096	452 aa	Predicted RBP	3.09	□□□□□ -1.91
BER1	YLR412W	SMA1	Q02651	245 aa		3.09	□□□□□ -1.91
BER1	YLR412W	YMR317W	Q04893	1140 aa		3.09	□□□□□ -1.91
BER1	YLR412W	CSR1	Q06705	408 aa	Known RBP	3.09	□□□□□ -1.91
BER1	YLR412W	TAH18	Q12181	623 aa		3.09	□□□□□ -1.91
BER1	YLR412W	ERG27	Q12452	347 aa	Known RBP	3.09	□□□□□ -1.91
BER1	YLR412W	GUK1	P15454	187 aa	Known RBP	3.08	□□□□□ -1.92
BER1	YLR412W	NOP1	P15646	327 aa	Known RBP	3.08	□□□□□ -1.92
BER1	YLR412W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms