RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W MRX1P40050 688 aa4.05□□□□□ -1.76
SMD2YLR275W ASE1P50275 885 aa4.05□□□□□ -1.76
SMD2YLR275W PFA5Q03289 374 aa4.05□□□□□ -1.76
SMD2YLR275W CRN1Q06440 651 aa4.05□□□□□ -1.76
SMD2YLR275W TPK1P06244 397 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-LR1P0C2J4 438 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-FP0CX61 438 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-GR2P0CX62 438 aa4.04□□□□□ -1.76
SMD2YLR275W PGI1P12709 554 aaKnown RBP4.04□□□□□ -1.76
SMD2YLR275W TY2A-CP25383 438 aa4.04□□□□□ -1.76
SMD2YLR275W YAT2P40017 923 aa4.04□□□□□ -1.76
SMD2YLR275W COG1P53079 417 aa4.04□□□□□ -1.76
SMD2YLR275W MRPL13Q02204 264 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-DR2Q03483 438 aa4.04□□□□□ -1.76
SMD2YLR275W ARP9Q05123 467 aa4.04□□□□□ -1.76
SMD2YLR275W BLS1Q06071 122 aa4.04□□□□□ -1.76
SMD2YLR275W GRS2Q06817 618 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-BQ12260 438 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-OR2Q12293 438 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-DR1Q12392 438 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-OR1Q12439 438 aa4.04□□□□□ -1.76
SMD2YLR275W TY2A-DR3Q99303 438 aa4.04□□□□□ -1.76
SMD2YLR275W CHO1P08456 276 aa4.03□□□□□ -1.76
SMD2YLR275W PET111P08468 800 aa4.03□□□□□ -1.76
SMD2YLR275W MTF2P10849 440 aa4.03□□□□□ -1.76
SMD2YLR275W STE50P25344 346 aa4.03□□□□□ -1.76
SMD2YLR275W SOF1P33750 489 aaKnown RBP4.03□□□□□ -1.76
SMD2YLR275W NTR2P36118 322 aaPredicted RBP4.03□□□□□ -1.76
SMD2YLR275W AAP1P37898 856 aaKnown RBP4.03□□□□□ -1.76
SMD2YLR275W ASI1P54074 624 aa4.03□□□□□ -1.76
SMD2YLR275W BET4Q00618 327 aa4.03□□□□□ -1.76
SMD2YLR275W DIG1Q03063 452 aaKnown RBP4.03□□□□□ -1.76
SMD2YLR275W YLR281CQ05863 155 aa4.03□□□□□ -1.76
SMD2YLR275W TMA16Q08687 178 aa4.03□□□□□ -1.76
SMD2YLR275W PCD1Q12524 340 aa4.03□□□□□ -1.76
SMD2YLR275W UBC1P21734 215 aaKnown RBP4.02□□□□□ -1.77
SMD2YLR275W RAD16P31244 790 aa4.02□□□□□ -1.77
SMD2YLR275W SEC31P38968 1273 aaKnown RBP4.02□□□□□ -1.77
SMD2YLR275W SWP82P43554 623 aa4.02□□□□□ -1.77
SMD2YLR275W CTK2P46962 323 aa4.02□□□□□ -1.77
SMD2YLR275W ESBP6P53918 673 aa4.02□□□□□ -1.77
SMD2YLR275W ECM16Q04217 1267 aaKnown RBP4.02□□□□□ -1.77
SMD2YLR275W UTP21Q06078 939 aaPredicted RBP4.02□□□□□ -1.77
SMD2YLR275W CSR1Q06705 408 aaKnown RBP4.02□□□□□ -1.77
SMD2YLR275W NDD1Q08887 554 aa4.02□□□□□ -1.77
SMD2YLR275W CBP1P07252 654 aa4.01□□□□□ -1.77
SMD2YLR275W TKL1P23254 680 aaKnown RBP4.01□□□□□ -1.77
SMD2YLR275W TFC3P34111 1160 aa4.01□□□□□ -1.77
SMD2YLR275W IFA38P38286 347 aa4.01□□□□□ -1.77
SMD2YLR275W LEU5P38702 357 aa4.01□□□□□ -1.77
SMD2YLR275W VRG4P40107 337 aa4.01□□□□□ -1.77
SMD2YLR275W MAF1P41910 395 aa4.01□□□□□ -1.77
SMD2YLR275W SAD1P43589 448 aa4.01□□□□□ -1.77
SMD2YLR275W RSM28Q03430 361 aa4.01□□□□□ -1.77
SMD2YLR275W MCP2Q06567 569 aa4.01□□□□□ -1.77
SMD2YLR275W GPN2Q08726 347 aaPredicted RBP4.01□□□□□ -1.77
SMD2YLR275W RAP1P11938 827 aa4□□□□□ -1.77
SMD2YLR275W DBF20P32328 564 aa4□□□□□ -1.77
SMD2YLR275W SAC1P32368 623 aaKnown RBP4□□□□□ -1.77
SMD2YLR275W SRB5P32585 307 aa4□□□□□ -1.77
SMD2YLR275W RKM3P38222 552 aa4□□□□□ -1.77
SMD2YLR275W ECM10P39987 644 aa4□□□□□ -1.77
SMD2YLR275W IST3P40565 148 aaPredicted RBP4□□□□□ -1.77
SMD2YLR275W SMK1P41808 388 aa4□□□□□ -1.77
SMD2YLR275W RPN11P43588 306 aaKnown RBP4□□□□□ -1.77
SMD2YLR275W IML2P47031 731 aa4□□□□□ -1.77
SMD2YLR275W YNL181WP53878 407 aa4□□□□□ -1.77
SMD2YLR275W FCP1Q03254 732 aa4□□□□□ -1.77
SMD2YLR275W ERG27Q12452 347 aaKnown RBP4□□□□□ -1.77
SMD2YLR275W XRS2P33301 854 aa3.99□□□□□ -1.77
SMD2YLR275W YND1P40009 630 aa3.99□□□□□ -1.77
SMD2YLR275W PFK26P40433 827 aaKnown RBP3.99□□□□□ -1.77
SMD2YLR275W CTF18P49956 741 aa3.99□□□□□ -1.77
SMD2YLR275W PSP1P50896 841 aaKnown RBP3.99□□□□□ -1.77
SMD2YLR275W YNL234WP53857 426 aa3.99□□□□□ -1.77
SMD2YLR275W ARP10Q04549 284 aa3.99□□□□□ -1.77
SMD2YLR275W YMR254CQ04838 102 aa3.99□□□□□ -1.77
SMD2YLR275W FMP42Q04991 504 aa3.99□□□□□ -1.77
SMD2YLR275W TFC6Q06339 672 aa3.99□□□□□ -1.77
SMD2YLR275W NRT1Q08485 598 aa3.99□□□□□ -1.77
SMD2YLR275W APL5Q08951 932 aaKnown RBP3.99□□□□□ -1.77
SMD2YLR275W PTH2P34222 208 aa3.98□□□□□ -1.77
SMD2YLR275W EFM2P38347 419 aa3.98□□□□□ -1.77
SMD2YLR275W RTT107P38850 1070 aa3.98□□□□□ -1.77
SMD2YLR275W SGF73P53165 657 aa3.98□□□□□ -1.77
SMD2YLR275W VCX1Q99385 411 aa3.98□□□□□ -1.77
SMD2YLR275W PFK2P16862 959 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SMD2YLR275W CLB2P24869 491 aa3.97□□□□□ -1.77
SMD2YLR275W CDC15P27636 974 aa3.97□□□□□ -1.77
SMD2YLR275W RFC1P38630 861 aaKnown RBP3.97□□□□□ -1.77
SMD2YLR275W YFR020WP43600 232 aa3.97□□□□□ -1.77
SMD2YLR275W YJR008WP47085 338 aa3.97□□□□□ -1.77
SMD2YLR275W YTP1P53584 459 aa3.97□□□□□ -1.77
SMD2YLR275W REG1Q00816 1014 aa3.97□□□□□ -1.77
SMD2YLR275W CTL1Q03220 320 aaKnown RBP3.97□□□□□ -1.77
SMD2YLR275W YOR111WQ99210 232 aa3.97□□□□□ -1.77
SMD2YLR275W KRS1P15180 591 aaKnown RBP3.96□□□□□ -1.78
SMD2YLR275W RGT1P32862 1170 aa3.96□□□□□ -1.78
SMD2YLR275W TEF4P36008 412 aaKnown RBP3.96□□□□□ -1.78
SMD2YLR275W ESL2P36168 1195 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms