RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C THI20Q08224 551 aa11.11□□□□□ -0.63
SPT8YLR055C VCX1Q99385 411 aa11.11□□□□□ -0.63
SPT8YLR055C SNF4P12904 322 aa11.1□□□□□ -0.63
SPT8YLR055C PEX1P24004 1043 aa11.1□□□□□ -0.63
SPT8YLR055C SYN8P31377 255 aa11.1□□□□□ -0.63
SPT8YLR055C PEP7P32609 515 aa11.1□□□□□ -0.63
SPT8YLR055C UTR2P32623 467 aa11.1□□□□□ -0.63
SPT8YLR055C SIF2P38262 535 aa11.1□□□□□ -0.63
SPT8YLR055C APE4P38821 490 aa11.1□□□□□ -0.63
SPT8YLR055C ARB1P40024 610 aaKnown RBP11.1□□□□□ -0.63
SPT8YLR055C GET1P53192 235 aa11.1□□□□□ -0.63
SPT8YLR055C BUD32P53323 261 aa11.1□□□□□ -0.63
SPT8YLR055C CDA1Q06702 301 aa11.1□□□□□ -0.63
SPT8YLR055C RPN8Q08723 338 aaKnown RBP11.1□□□□□ -0.63
SPT8YLR055C DDC1Q08949 612 aa11.1□□□□□ -0.63
SPT8YLR055C HSH49Q99181 213 aaPredicted RBP11.1□□□□□ -0.63
SPT8YLR055C AMD2P22580 549 aa11.09□□□□□ -0.63
SPT8YLR055C YCL068CP25593 260 aa11.09□□□□□ -0.63
SPT8YLR055C RIM1P32445 135 aaKnown RBP11.09□□□□□ -0.63
SPT8YLR055C UGP1P32861 499 aaKnown RBP11.09□□□□□ -0.63
SPT8YLR055C RPT5P33297 434 aaKnown RBP11.09□□□□□ -0.63
SPT8YLR055C ABZ1P37254 787 aaPredicted RBP11.09□□□□□ -0.63
SPT8YLR055C KAP104P38217 918 aaKnown RBP11.09□□□□□ -0.63
SPT8YLR055C IML2P47031 731 aa11.09□□□□□ -0.63
SPT8YLR055C ASN2P49090 572 aaKnown RBP11.09□□□□□ -0.63
SPT8YLR055C MRK1P50873 501 aa11.09□□□□□ -0.63
SPT8YLR055C GLO2Q05584 274 aa11.09□□□□□ -0.63
SPT8YLR055C JIP5Q06214 492 aaPredicted RBP11.09□□□□□ -0.63
SPT8YLR055C NBP2Q12163 236 aa11.09□□□□□ -0.63
SPT8YLR055C NHA1Q99271 985 aa11.09□□□□□ -0.63
SPT8YLR055C MSS116P15424 664 aaKnown RBP11.09□□□□□ -0.63
SPT8YLR055C MET4P32389 672 aa11.09□□□□□ -0.63
SPT8YLR055C AEP1P32493 518 aa11.09□□□□□ -0.63
SPT8YLR055C RAD55P38953 406 aa11.09□□□□□ -0.63
SPT8YLR055C VPS25P47142 202 aa11.09□□□□□ -0.63
SPT8YLR055C SLG1P54867 378 aa11.09□□□□□ -0.63
SPT8YLR055C SRL4Q03085 281 aa11.09□□□□□ -0.63
SPT8YLR055C YMR155WQ03795 547 aa11.09□□□□□ -0.63
SPT8YLR055C FMP42Q04991 504 aa11.09□□□□□ -0.63
SPT8YLR055C CDC123Q05791 360 aa11.09□□□□□ -0.63
SPT8YLR055C MCM21Q06675 368 aa11.09□□□□□ -0.63
SPT8YLR055C RCL1Q08096 367 aaPredicted RBP11.09□□□□□ -0.63
SPT8YLR055C PSY3Q12318 242 aa11.09□□□□□ -0.63
SPT8YLR055C SPE1P08432 466 aa11.08□□□□□ -0.64
SPT8YLR055C PDE1P22434 369 aa11.08□□□□□ -0.64
SPT8YLR055C PEX5P35056 612 aa11.08□□□□□ -0.64
SPT8YLR055C AIM18P38884 321 aa11.08□□□□□ -0.64
SPT8YLR055C PCF11P39081 626 aaPredicted RBP11.08□□□□□ -0.64
SPT8YLR055C YRB1P41920 201 aaKnown RBP11.08□□□□□ -0.64
SPT8YLR055C GRX3Q03835 250 aa11.08□□□□□ -0.64
SPT8YLR055C SAM3Q08986 587 aa11.08□□□□□ -0.64
SPT8YLR055C SEC15P22224 910 aa11.07□□□□□ -0.64
SPT8YLR055C MSH2P25847 964 aa11.07□□□□□ -0.64
SPT8YLR055C NGG1P32494 702 aa11.07□□□□□ -0.64
SPT8YLR055C MDJ1P35191 511 aa11.07□□□□□ -0.64
SPT8YLR055C HSL7P38274 827 aa11.07□□□□□ -0.64
SPT8YLR055C ARN1P38731 627 aa11.07□□□□□ -0.64
SPT8YLR055C NMD3P38861 518 aaKnown RBP11.07□□□□□ -0.64
SPT8YLR055C RRT5P43607 289 aa11.07□□□□□ -0.64
SPT8YLR055C GUF1P46943 645 aa11.07□□□□□ -0.64
SPT8YLR055C YGR127WP53275 312 aa11.07□□□□□ -0.64
SPT8YLR055C RSC2Q06488 889 aa11.07□□□□□ -0.64
SPT8YLR055C NRT1Q08485 598 aa11.07□□□□□ -0.64
SPT8YLR055C CBC2Q08920 208 aaKnown RBP RIP-Chip data11.07□□□□□ -0.64not detected
SPT8YLR055C HOS1Q12214 470 aa11.07□□□□□ -0.64
SPT8YLR055C YDR034W-BQ6Q5X2 51 aa11.07□□□□□ -0.64
SPT8YLR055C HSP60P19882 572 aaKnown RBP11.07□□□□□ -0.64
SPT8YLR055C TFB1P32776 642 aa11.07□□□□□ -0.64
SPT8YLR055C BEM3P32873 1128 aa11.07□□□□□ -0.64
SPT8YLR055C PTC1P35182 281 aa11.07□□□□□ -0.64
SPT8YLR055C TPO5P36029 618 aa11.07□□□□□ -0.64
SPT8YLR055C RIC1P40395 1056 aa11.07□□□□□ -0.64
SPT8YLR055C CSN9Q03981 162 aa11.07□□□□□ -0.64
SPT8YLR055C SPB1P25582 841 aaPredicted RBP11.06□□□□□ -0.64
SPT8YLR055C PTP2P29461 750 aa11.06□□□□□ -0.64
SPT8YLR055C PMI40P29952 429 aaKnown RBP11.06□□□□□ -0.64
SPT8YLR055C ATP7P30902 174 aa11.06□□□□□ -0.64
SPT8YLR055C GDA1P32621 518 aa11.06□□□□□ -0.64
SPT8YLR055C HSP78P33416 811 aa11.06□□□□□ -0.64
SPT8YLR055C EXO84P38261 753 aa11.06□□□□□ -0.64
SPT8YLR055C TDP1P38319 544 aa11.06□□□□□ -0.64
SPT8YLR055C YBR285WP38354 144 aa11.06□□□□□ -0.64
SPT8YLR055C PEX18P38855 283 aa11.06□□□□□ -0.64
SPT8YLR055C MEF2P39677 819 aa11.06□□□□□ -0.64
SPT8YLR055C CDC1P40986 491 aa11.06□□□□□ -0.64
SPT8YLR055C BFA1P47113 574 aa11.06□□□□□ -0.64
SPT8YLR055C GPI1P53306 609 aa11.06□□□□□ -0.64
SPT8YLR055C ARC35P53731 342 aaKnown RBP11.06□□□□□ -0.64
SPT8YLR055C TFB3Q03290 321 aa11.06□□□□□ -0.64
SPT8YLR055C SEC10Q06245 871 aa11.06□□□□□ -0.64
SPT8YLR055C MUM3Q08750 479 aa11.06□□□□□ -0.64
SPT8YLR055C ASK1P35734 292 aa11.05□□□□□ -0.64
SPT8YLR055C YKR023WP36119 530 aaKnown RBP11.05□□□□□ -0.64
SPT8YLR055C FAA2P39518 744 aa11.05□□□□□ -0.64
SPT8YLR055C AIF1P52923 378 aa11.05□□□□□ -0.64
SPT8YLR055C YNL010WP53981 241 aaKnown RBP11.05□□□□□ -0.64
SPT8YLR055C MTD1Q02046 320 aaKnown RBP11.05□□□□□ -0.64
SPT8YLR055C HER2Q03557 464 aa11.05□□□□□ -0.64
SPT8YLR055C GMC2Q06201 188 aa11.05□□□□□ -0.64
SPT8YLR055C APC5Q08683 685 aa11.05□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms