RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
MSH1YHR120W YLL056CQ12177 298 aa5.09□□□□□ -1.59
MSH1YHR120W TAF3Q12297 353 aa5.09□□□□□ -1.59
MSH1YHR120W CMD1P06787 147 aaKnown RBP5.09□□□□□ -1.6
MSH1YHR120W IMA3P0CW40 589 aa5.09□□□□□ -1.6
MSH1YHR120W IMA4P0CW41 589 aa5.09□□□□□ -1.6
MSH1YHR120W RML2P32611 393 aa5.09□□□□□ -1.6
MSH1YHR120W RGD2P43556 714 aa5.09□□□□□ -1.6
MSH1YHR120W UBP6P43593 499 aaKnown RBP5.09□□□□□ -1.6
MSH1YHR120W RCF2P53721 224 aa5.09□□□□□ -1.6
MSH1YHR120W IPI3P53877 555 aa5.09□□□□□ -1.6
MSH1YHR120W NMA111P53920 997 aa5.09□□□□□ -1.6
MSH1YHR120W AQR1P53943 586 aa5.09□□□□□ -1.6
MSH1YHR120W SPO19Q03029 223 aa5.09□□□□□ -1.6
MSH1YHR120W HFD1Q04458 532 aa5.09□□□□□ -1.6
MSH1YHR120W HEL2Q05580 639 aaKnown RBP5.09□□□□□ -1.6
MSH1YHR120W IMA2Q08295 589 aa5.09□□□□□ -1.6
MSH1YHR120W YIG1Q08956 461 aa5.09□□□□□ -1.6
MSH1YHR120W PGC1Q08959 321 aa5.09□□□□□ -1.6
MSH1YHR120W SPE4Q12455 300 aa5.09□□□□□ -1.6
MSH1YHR120W TAL1P15019 335 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W SPS22P25380 463 aa5.08□□□□□ -1.6
MSH1YHR120W CCR4P31384 837 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W SSE1P32589 693 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W CBF5P33322 483 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
MSH1YHR120W ALY1P36117 915 aa5.08□□□□□ -1.6
MSH1YHR120W WSC4P38739 605 aa5.08□□□□□ -1.6
MSH1YHR120W OAF1P39720 1047 aaPredicted RBP5.08□□□□□ -1.6
MSH1YHR120W YJR061WP40355 935 aa5.08□□□□□ -1.6
MSH1YHR120W PAN6P40459 309 aa5.08□□□□□ -1.6
MSH1YHR120W RLP7P40693 322 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W ROK1P45818 564 aaPredicted RBP5.08□□□□□ -1.6
MSH1YHR120W TIM13P53299 105 aa5.08□□□□□ -1.6
MSH1YHR120W AAD15Q08361 143 aa5.08□□□□□ -1.6
MSH1YHR120W SNX3Q08826 162 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W SLP1Q12232 587 aa5.08□□□□□ -1.6
MSH1YHR120W AI5_ALPHAQ9ZZX1 630 aa5.08□□□□□ -1.6
MSH1YHR120W MCM5P29496 775 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W LIP5P32875 414 aa5.08□□□□□ -1.6
MSH1YHR120W DCW1P36091 449 aa5.08□□□□□ -1.6
MSH1YHR120W YHL041WP38730 149 aa5.08□□□□□ -1.6
MSH1YHR120W SMF2P38778 549 aa5.08□□□□□ -1.6
MSH1YHR120W BAT1P38891 393 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W YAT2P40017 923 aa5.08□□□□□ -1.6
MSH1YHR120W ELO3P40319 345 aa5.08□□□□□ -1.6
MSH1YHR120W MNT2P53059 558 aa5.08□□□□□ -1.6
MSH1YHR120W GND2P53319 492 aa5.08□□□□□ -1.6
MSH1YHR120W LGE1Q02796 332 aaKnown RBP5.08□□□□□ -1.6
MSH1YHR120W ARP9Q05123 467 aa5.08□□□□□ -1.6
MSH1YHR120W NRT1Q08485 598 aa5.08□□□□□ -1.6
MSH1YHR120W LEU1P07264 779 aaKnown RBP5.07□□□□□ -1.6
MSH1YHR120W CDC24P11433 854 aaPredicted RBP5.07□□□□□ -1.6
MSH1YHR120W MGT1P26188 188 aa5.07□□□□□ -1.6
MSH1YHR120W SRX1P36077 127 aa5.07□□□□□ -1.6
MSH1YHR120W TGL4P36165 910 aa5.07□□□□□ -1.6
MSH1YHR120W RTA1P53047 317 aa5.07□□□□□ -1.6
MSH1YHR120W STR3P53101 465 aaKnown RBP5.07□□□□□ -1.6
MSH1YHR120W OSH6Q02201 448 aa5.07□□□□□ -1.6
MSH1YHR120W RPC11Q04307 110 aaPredicted RBP5.07□□□□□ -1.6
MSH1YHR120W YPR114WQ06107 315 aa5.07□□□□□ -1.6
MSH1YHR120W YLR053CQ12026 108 aa5.07□□□□□ -1.6
MSH1YHR120W SSC1P0CS90 654 aaKnown RBP5.07□□□□□ -1.6
MSH1YHR120W SCH9P11792 824 aaKnown RBP5.07□□□□□ -1.6
MSH1YHR120W MNE1P24720 663 aa5.07□□□□□ -1.6
MSH1YHR120W URA7P28274 579 aaKnown RBP5.07□□□□□ -1.6
MSH1YHR120W MLS1P30952 554 aa5.07□□□□□ -1.6
MSH1YHR120W ETR1P38071 380 aa5.07□□□□□ -1.6
MSH1YHR120W YHR078WP38799 552 aa5.07□□□□□ -1.6
MSH1YHR120W BEM4P39011 633 aa5.07□□□□□ -1.6
MSH1YHR120W IST3P40565 148 aaPredicted RBP5.07□□□□□ -1.6
MSH1YHR120W GLG2P47011 380 aa5.07□□□□□ -1.6
MSH1YHR120W COS6P53344 381 aa5.07□□□□□ -1.6
MSH1YHR120W REG1Q00816 1014 aa5.07□□□□□ -1.6
MSH1YHR120W TRE2Q08693 809 aa5.07□□□□□ -1.6
MSH1YHR120W UTR2P32623 467 aa5.06□□□□□ -1.6
MSH1YHR120W PMT1P33775 817 aa5.06□□□□□ -1.6
MSH1YHR120W TSC10P38342 320 aa5.06□□□□□ -1.6
MSH1YHR120W CKB2P38930 258 aa5.06□□□□□ -1.6
MSH1YHR120W TFG1P41895 735 aaPredicted RBP5.06□□□□□ -1.6
MSH1YHR120W YJR124CP47159 448 aa5.06□□□□□ -1.6
MSH1YHR120W COQ5P49017 307 aa5.06□□□□□ -1.6
MSH1YHR120W USE1P53146 245 aa5.06□□□□□ -1.6
MSH1YHR120W COG7P53195 279 aa5.06□□□□□ -1.6
MSH1YHR120W TEP1P53916 434 aa5.06□□□□□ -1.6
MSH1YHR120W OPI10Q08202 246 aa5.06□□□□□ -1.6
MSH1YHR120W SCC4P40090 624 aa5.06□□□□□ -1.6
MSH1YHR120W ADE13Q05911 482 aaKnown RBP5.06□□□□□ -1.6
MSH1YHR120W CUE5Q08412 411 aaKnown RBP5.06□□□□□ -1.6
MSH1YHR120W ACO1P19414 778 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
MSH1YHR120W PMA2P19657 947 aa5.06□□□□□ -1.6
MSH1YHR120W RBK1P25332 333 aa5.06□□□□□ -1.6
MSH1YHR120W PMI40P29952 429 aaKnown RBP5.06□□□□□ -1.6
MSH1YHR120W SIP2P34164 415 aaKnown RBP5.06□□□□□ -1.6
MSH1YHR120W ARC1P46672 376 aaKnown RBP5.06□□□□□ -1.6
MSH1YHR120W BUD13P46947 266 aaPredicted RBP5.06□□□□□ -1.6
MSH1YHR120W FMP33P46998 180 aa5.06□□□□□ -1.6
MSH1YHR120W PXR1P53335 271 aaPredicted RBP5.06□□□□□ -1.6
MSH1YHR120W VAC7P53950 1165 aa5.06□□□□□ -1.6
MSH1YHR120W ATP25Q03153 612 aa5.06□□□□□ -1.6
MSH1YHR120W LDB18Q07887 179 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms