RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C ECM16Q04217 1267 aaKnown RBP3.21□□□□□ -1.9
SWC4YGR002C CRN1Q06440 651 aa3.21□□□□□ -1.9
SWC4YGR002C IMH1Q06704 911 aaKnown RBP3.21□□□□□ -1.9
SWC4YGR002C GET3Q12154 354 aaKnown RBP3.21□□□□□ -1.9
SWC4YGR002C GAL4P04386 881 aa3.2□□□□□ -1.9
SWC4YGR002C ECM32P32644 1121 aaKnown RBP3.2□□□□□ -1.9
SWC4YGR002C ADE17P38009 592 aaKnown RBP3.2□□□□□ -1.9
SWC4YGR002C UBP13P38187 747 aa3.2□□□□□ -1.9
SWC4YGR002C AXL2P38928 823 aa3.2□□□□□ -1.9
SWC4YGR002C PSD1P39006 500 aa3.2□□□□□ -1.9
SWC4YGR002C RIC1P40395 1056 aa3.2□□□□□ -1.9
SWC4YGR002C ASG1P40467 964 aa3.2□□□□□ -1.9
SWC4YGR002C CDC1P40986 491 aa3.2□□□□□ -1.9
SWC4YGR002C RCF1Q03713 159 aa3.2□□□□□ -1.9
SWC4YGR002C SSP2Q08646 371 aa3.2□□□□□ -1.9
SWC4YGR002C ERG27Q12452 347 aaKnown RBP3.2□□□□□ -1.9
SWC4YGR002C SAC3P46674 1301 aa3.2□□□□□ -1.9
SWC4YGR002C ERG8P24521 451 aa3.19□□□□□ -1.9
SWC4YGR002C RPN12P32496 274 aa3.19□□□□□ -1.9
SWC4YGR002C JHD1P40034 492 aa3.19□□□□□ -1.9
SWC4YGR002C PFK26P40433 827 aaKnown RBP3.19□□□□□ -1.9
SWC4YGR002C YJL107CP42947 387 aa3.19□□□□□ -1.9
SWC4YGR002C DCP2P53550 970 aaKnown RBP3.19□□□□□ -1.9
SWC4YGR002C YDR341CQ05506 607 aaKnown RBP3.19□□□□□ -1.9
SWC4YGR002C COG4Q06096 861 aa3.19□□□□□ -1.9
SWC4YGR002C PDR8Q06149 701 aa3.19□□□□□ -1.9
SWC4YGR002C YER145C-AA0A023PYF4 145 aa3.19□□□□□ -1.9
SWC4YGR002C DAL5P15365 543 aa3.19□□□□□ -1.9
SWC4YGR002C YCR006CP25350 157 aa3.19□□□□□ -1.9
SWC4YGR002C SAS3P34218 831 aa3.19□□□□□ -1.9
SWC4YGR002C ARN1P38731 627 aa3.19□□□□□ -1.9
SWC4YGR002C PHM8P40025 321 aa3.19□□□□□ -1.9
SWC4YGR002C KAP123P40069 1113 aaKnown RBP3.19□□□□□ -1.9
SWC4YGR002C SWP82P43554 623 aa3.19□□□□□ -1.9
SWC4YGR002C YNL144CP53907 740 aa3.19□□□□□ -1.9
SWC4YGR002C MPS1P54199 764 aa3.19□□□□□ -1.9
SWC4YGR002C PRP3Q03338 469 aaPredicted RBP3.19□□□□□ -1.9
SWC4YGR002C SNO4Q04902 237 aa3.19□□□□□ -1.9
SWC4YGR002C PSK2Q08217 1101 aa3.19□□□□□ -1.9
SWC4YGR002C MCH4Q08268 501 aa3.19□□□□□ -1.9
SWC4YGR002C HSP33Q08914 237 aaKnown RBP3.19□□□□□ -1.9
SWC4YGR002C HSP32Q08992 237 aa3.19□□□□□ -1.9
SWC4YGR002C RRI1Q12468 440 aa3.19□□□□□ -1.9
SWC4YGR002C VCX1Q99385 411 aa3.19□□□□□ -1.9
SWC4YGR002C GPA1P08539 472 aa3.18□□□□□ -1.9
SWC4YGR002C MRP2P10663 115 aaPredicted RBP3.18□□□□□ -1.9
SWC4YGR002C SRB5P32585 307 aa3.18□□□□□ -1.9
SWC4YGR002C OCT1P35999 772 aa3.18□□□□□ -1.9
SWC4YGR002C LHS1P36016 881 aa3.18□□□□□ -1.9
SWC4YGR002C NTR2P36118 322 aaPredicted RBP3.18□□□□□ -1.9
SWC4YGR002C SCO2P38072 301 aa3.18□□□□□ -1.9
SWC4YGR002C KTR3P38130 404 aaPredicted RBP3.18□□□□□ -1.9
SWC4YGR002C MUM2P38236 366 aa3.18□□□□□ -1.9
SWC4YGR002C YMR124WP39523 943 aaKnown RBP3.18□□□□□ -1.9
SWC4YGR002C YER010CP40011 234 aa3.18□□□□□ -1.9
SWC4YGR002C MNT3P40549 630 aa3.18□□□□□ -1.9
SWC4YGR002C CFD1P40558 293 aa3.18□□□□□ -1.9
SWC4YGR002C HOS2P53096 452 aaPredicted RBP3.18□□□□□ -1.9
SWC4YGR002C PFA5Q03289 374 aa3.18□□□□□ -1.9
SWC4YGR002C ECM22Q05958 814 aaPredicted RBP3.18□□□□□ -1.9
SWC4YGR002C CFT2Q12102 859 aaPredicted RBP3.18□□□□□ -1.9
SWC4YGR002C YLR049CQ12110 428 aa3.18□□□□□ -1.9
SWC4YGR002C HER1Q12276 1246 aa3.18□□□□□ -1.9
SWC4YGR002C HSP42Q12329 375 aa3.18□□□□□ -1.9
SWC4YGR002C ERP4Q12450 207 aa3.18□□□□□ -1.9
SWC4YGR002C YOR019WQ99248 730 aa3.18□□□□□ -1.9
SWC4YGR002C SRP54P20424 541 aaKnown RBP3.17□□□□□ -1.9
SWC4YGR002C MRP20P32387 263 aa3.17□□□□□ -1.9
SWC4YGR002C SWI3P32591 825 aa3.17□□□□□ -1.9
SWC4YGR002C CBF5P33322 483 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
SWC4YGR002C SOF1P33750 489 aaKnown RBP3.17□□□□□ -1.9
SWC4YGR002C RRN3P36070 627 aa3.17□□□□□ -1.9
SWC4YGR002C MRX1P40050 688 aa3.17□□□□□ -1.9
SWC4YGR002C VPS4P52917 437 aa3.17□□□□□ -1.9
SWC4YGR002C YGL036WP53185 909 aaPredicted RBP3.17□□□□□ -1.9
SWC4YGR002C YNR061CP53747 219 aa3.17□□□□□ -1.9
SWC4YGR002C NEW1Q08972 1196 aaKnown RBP3.17□□□□□ -1.9
SWC4YGR002C YER190C-BP0CX94 160 aa3.16□□□□□ -1.9
SWC4YGR002C YEL077W-AP0CX95 160 aa3.16□□□□□ -1.9
SWC4YGR002C YGR296C-BP0CX96 160 aa3.16□□□□□ -1.9
SWC4YGR002C YPL283W-BP0CX97 160 aa3.16□□□□□ -1.9
SWC4YGR002C YPR204C-AP0CX98 160 aa3.16□□□□□ -1.9
SWC4YGR002C CNA1P23287 553 aa3.16□□□□□ -1.9
SWC4YGR002C BRF1P29056 596 aa3.16□□□□□ -1.9
SWC4YGR002C SSH4P32343 579 aa3.16□□□□□ -1.9
SWC4YGR002C PXL1P36166 706 aa3.16□□□□□ -1.9
SWC4YGR002C JNM1P36224 373 aa3.16□□□□□ -1.9
SWC4YGR002C AAP1P37898 856 aaKnown RBP3.16□□□□□ -1.9
SWC4YGR002C YPT11P48559 417 aa3.16□□□□□ -1.9
SWC4YGR002C CBK1P53894 756 aa3.16□□□□□ -1.9
SWC4YGR002C MDM1Q01846 1127 aa3.16□□□□□ -1.9
SWC4YGR002C RSM28Q03430 361 aa3.16□□□□□ -1.9
SWC4YGR002C YMR018WQ04364 514 aa3.16□□□□□ -1.9
SWC4YGR002C YLR455WQ06188 304 aa3.16□□□□□ -1.9
SWC4YGR002C GPN2Q08726 347 aaPredicted RBP3.16□□□□□ -1.9
SWC4YGR002C NUS1Q12063 375 aa3.16□□□□□ -1.9
SWC4YGR002C TY1B-AO13527 1196 aaKnown RBP3.15□□□□□ -1.91
SWC4YGR002C YPR089WO13585 888 aa3.15□□□□□ -1.91
SWC4YGR002C RPB2P08518 1224 aaKnown RBP3.15□□□□□ -1.91
SWC4YGR002C RER1P25560 188 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms