RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 GJB4Q9NTQ9 266 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 USP40Q9NVE5 1235 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 VPS54Q9P1Q0 977 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 SAP30BPQ9UHR5 308 aaKnown RBP9.52□□□□□ -0.89
PNKP-231ENST00000640501 KCNH3Q9ULD8 1083 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 DAGLAQ9Y4D2 1042 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 CCDC194A0A1B0GVG4 234 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 USP17L3A6NCW0 530 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 USP17L4A6NCW7 530 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 LAD1O00515 517 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
PNKP-231ENST00000640501 PLEKHA8P1O95397 391 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 PTPREP23469 700 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 CDC25BP30305 580 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 GUCY1A2P33402 732 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 NLRP12P59046 1061 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 FUT2Q10981 343 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 ORC2Q13416 577 aaPredicted RBP9.51□□□□□ -0.89
PNKP-231ENST00000640501 PKN1Q16512 942 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 ASPRV1Q53RT3 343 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 CT47A1Q5JQC4 288 aaPredicted RBP9.51□□□□□ -0.89
PNKP-231ENST00000640501 RCSD1Q6JBY9 416 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 SARM1Q6SZW1 724 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 USP17L1Q7RTZ2 530 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 RTKN2Q8IZC4 609 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 BLIDQ8IZY5 108 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 CMTR1Q8N1G2 835 aaKnown RBP9.51□□□□□ -0.89
PNKP-231ENST00000640501 TRIML1Q8N9V2 468 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 DYNLL2Q96FJ2 89 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 DNAJC25Q9H1X3 360 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 C6orf50Q9HD87 102 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 PCDHA4Q9UN74 947 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 HPSEQ9Y251 543 aa9.51□□□□□ -0.89
PNKP-231ENST00000640501 ZNF500O60304 480 aaPredicted RBP9.5□□□□□ -0.89
PNKP-231ENST00000640501 NEMFO60524 1076 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 NMT2O60551 498 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 TTLL1O95922 423 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 PLCD1P51178 756 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 PICALMQ13492 652 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 ARL6IP4Q66PJ3 421 aaKnown RBP9.5□□□□□ -0.89
PNKP-231ENST00000640501 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.5□□□□□ -0.89
PNKP-231ENST00000640501 KRBA2Q6ZNG9 492 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 SRBD1Q8N5C6 995 aaKnown RBP9.5□□□□□ -0.89
PNKP-231ENST00000640501 DAGLBQ8NCG7 672 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 ZDHHC15Q96MV8 337 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 TMEM47Q9BQJ4 181 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 GLT8D2Q9H1C3 349 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 IL17RBQ9NRM6 502 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 TMOD2Q9NZR1 351 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 HDAC9Q9UKV0 1011 aa9.5□□□□□ -0.89
PNKP-231ENST00000640501 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 KLRF2D3W0D1 207 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 IKBKBO14920 756 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 CBFA2T2O43439 604 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 ECE2O60344 883 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 WDHD1O75717 1129 aaPredicted RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 CRKP46108 304 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 RBM5P52756 815 aaKnown RBP eCLIP9.49□□□□□ -0.89
PNKP-231ENST00000640501 TRAF1Q13077 416 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 NR5A1Q13285 461 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 GRIK5Q16478 980 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 SLC4A8Q2Y0W8 1093 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 GPATCH4Q5T3I0 446 aaKnown RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 MSL1Q68DK7 614 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 MCTP2Q6DN12 878 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 PPP1R18Q6NYC8 613 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 SHC4Q6S5L8 630 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 SMARCE1Q969G3 411 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 MRFAP1L1Q96HT8 127 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 GTPBP4Q9BZE4 634 aaKnown RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 OSBPL5Q9H0X9 879 aaPredicted RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 BARHL2Q9NY43 387 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 MAD2L2Q9UI95 211 aa9.49□□□□□ -0.89
PNKP-231ENST00000640501 FBXO2Q9UK22 296 aaPredicted RBP9.49□□□□□ -0.89
PNKP-231ENST00000640501 SNED1Q8TER0 1413 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 COL2A1P02458 1487 aaPredicted RBP9.48□□□□□ -0.89
PNKP-231ENST00000640501 ATP2B1P20020 1258 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 LONP1P36776 959 aaKnown RBP9.48□□□□□ -0.89
PNKP-231ENST00000640501 MMP14P50281 582 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 TOB1P50616 345 aaPredicted RBP9.48□□□□□ -0.89
PNKP-231ENST00000640501 NAPAP54920 295 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 HEATR3Q7Z4Q2 680 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 FOXP4Q8IVH2 680 aaPredicted RBP9.48□□□□□ -0.89
PNKP-231ENST00000640501 MLKLQ8NB16 471 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 NAP1L4Q99733 375 aaKnown RBP9.48□□□□□ -0.89
PNKP-231ENST00000640501 MTMR4Q9NYA4 1195 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 TUBE1Q9UJT0 475 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms