RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 CTR9Q6PD62 1173 aa24.13■■□□□ 1.45
CLN6-222ENST00000637667 SIAH1Q8IUQ4 282 aa24.13■■□□□ 1.45
CLN6-222ENST00000637667 ANKLE1Q8NAG6 615 aa24.13■■□□□ 1.45
CLN6-222ENST00000637667 PAWRQ96IZ0 340 aaKnown RBP24.13■■□□□ 1.45
CLN6-222ENST00000637667 STRBPQ96SI9 672 aaKnown RBP24.13■■□□□ 1.45
CLN6-222ENST00000637667 TANGO6Q9C0B7 1094 aa24.13■■□□□ 1.45
CLN6-222ENST00000637667 CCL14Q16627 93 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 KIAA1755Q5JYT7 1200 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 NECAB2Q7Z6G3 386 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 DIS3LQ8TF46 1054 aaKnown RBP24.12■■□□□ 1.45
CLN6-222ENST00000637667 LPAR1Q92633 364 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 SH2D4AQ9H788 454 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 HOXC10Q9NYD6 342 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 TMX2Q9Y320 296 aa24.12■■□□□ 1.45
CLN6-222ENST00000637667 BAZ2AQ9UIF9 1905 aaKnown RBP24.12■■□□□ 1.45
CLN6-222ENST00000637667 SLC15A5A6NIM6 579 aa24.11■■□□□ 1.45
CLN6-222ENST00000637667 PTPREP23469 700 aa24.11■■□□□ 1.45
CLN6-222ENST00000637667 CACNB2Q08289 660 aaPredicted RBP24.11■■□□□ 1.45
CLN6-222ENST00000637667 APPBP2Q92624 585 aa24.11■■□□□ 1.45
CLN6-222ENST00000637667 ARPP21Q9UBL0 812 aaPredicted RBP24.11■■□□□ 1.45
CLN6-222ENST00000637667 MYH7P12883 1935 aa24.11■■□□□ 1.45
CLN6-222ENST00000637667 RNF113AO15541 343 aaKnown RBP24.1■■□□□ 1.45
CLN6-222ENST00000637667 CHRDL2Q6WN34 429 aa24.1■■□□□ 1.45
CLN6-222ENST00000637667 OSBP2Q969R2 916 aa24.1■■□□□ 1.45
CLN6-222ENST00000637667 VCPKMTQ9H867 229 aa24.1■■□□□ 1.45
CLN6-222ENST00000637667 OGDHLQ9ULD0 1010 aa24.1■■□□□ 1.45
CLN6-222ENST00000637667 IVNS1ABPQ9Y6Y0 642 aa24.1■■□□□ 1.45
CLN6-222ENST00000637667 EVI5O60447 810 aa24.09■■□□□ 1.45
CLN6-222ENST00000637667 ZFYP08048 801 aaPredicted RBP24.09■■□□□ 1.45
CLN6-222ENST00000637667 RRP1P56182 461 aaKnown RBP24.09■■□□□ 1.45
CLN6-222ENST00000637667 GRB14Q14449 540 aa24.09■■□□□ 1.45
CLN6-222ENST00000637667 SPICE1Q8N0Z3 855 aa24.09■■□□□ 1.45
CLN6-222ENST00000637667 GSG1L2A8MUP6 293 aa24.08■■□□□ 1.45
CLN6-222ENST00000637667 MNX1P50219 401 aaPredicted RBP24.08■■□□□ 1.45
CLN6-222ENST00000637667 FXR1P51114 621 aaKnown RBP eCLIP24.08■■□□□ 1.45
CLN6-222ENST00000637667 SBK1Q52WX2 424 aa24.08■■□□□ 1.45
CLN6-222ENST00000637667 GIMAP6Q6P9H5 292 aa24.08■■□□□ 1.45
CLN6-222ENST00000637667 MB21D1Q8N884 522 aa24.08■■□□□ 1.45
CLN6-222ENST00000637667 MOV10L1Q9BXT6 1211 aaKnown RBP24.08■■□□□ 1.45
CLN6-222ENST00000637667 NBPF3Q9H094 633 aa24.08■■□□□ 1.45
CLN6-222ENST00000637667 KANSL2Q9H9L4 492 aa24.08■■□□□ 1.45
CLN6-222ENST00000637667 TTC41PQ6P2S7 1318 aa24.08■■□□□ 1.44
CLN6-222ENST00000637667 FLOT1O75955 427 aa24.07■■□□□ 1.44
CLN6-222ENST00000637667 HOXC6P09630 235 aa24.07■■□□□ 1.44
CLN6-222ENST00000637667 EEF2P13639 858 aaKnown RBP24.07■■□□□ 1.44
CLN6-222ENST00000637667 CCND3P30281 292 aaPredicted RBP24.07■■□□□ 1.44
CLN6-222ENST00000637667 DSG3P32926 999 aa24.07■■□□□ 1.44
CLN6-222ENST00000637667 ATP2B2Q01814 1243 aa24.07■■□□□ 1.44
CLN6-222ENST00000637667 MFSD14CQ5VZR4 134 aa24.07■■□□□ 1.44
CLN6-222ENST00000637667 SPATC1LQ9H0A9 340 aa24.07■■□□□ 1.44
CLN6-222ENST00000637667 ERC2O15083 957 aa24.06■■□□□ 1.44
CLN6-222ENST00000637667 WDR46O15213 610 aaKnown RBP24.06■■□□□ 1.44
CLN6-222ENST00000637667 GPAA1O43292 621 aa24.06■■□□□ 1.44
CLN6-222ENST00000637667 LRRFIP1Q32MZ4 808 aaKnown RBP24.06■■□□□ 1.44
CLN6-222ENST00000637667 SHCBP1Q8NEM2 672 aa24.06■■□□□ 1.44
CLN6-222ENST00000637667 OTUD7AQ8TE49 926 aaPredicted RBP24.06■■□□□ 1.44
CLN6-222ENST00000637667 FLRT1Q9NZU1 646 aa24.06■■□□□ 1.44
CLN6-222ENST00000637667 PI4K2BQ8TCG2 481 aa24.05■■□□□ 1.44
CLN6-222ENST00000637667 ATG4CQ96DT6 458 aa24.05■■□□□ 1.44
CLN6-222ENST00000637667 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.05■■□□□ 1.44
CLN6-222ENST00000637667 MYH8P13535 1937 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 RANBP2P49792 3224 aaKnown RBP24.04■■□□□ 1.44
CLN6-222ENST00000637667 MINDY4BA8MYZ0 360 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 M0R2C6 588 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 GNAT2P19087 354 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 ERCC3P19447 782 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 LHX8Q68G74 356 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 NPLOC4Q8TAT6 608 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 C11orf49Q9H6J7 331 aa24.04■■□□□ 1.44
CLN6-222ENST00000637667 RBM27Q9P2N5 1060 aaKnown RBP24.04■■□□□ 1.44
CLN6-222ENST00000637667 STRNO43815 780 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 RASA1P20936 1047 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 PLS1Q14651 629 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 SAMD1Q6SPF0 538 aaPredicted RBP24.03■■□□□ 1.44
CLN6-222ENST00000637667 STK11IPQ8N1F8 1099 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 MKNK2Q9HBH9 465 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 EPB41L4AQ9HCS5 686 aaPredicted RBP24.03■■□□□ 1.44
CLN6-222ENST00000637667 GOPCQ9HD26 462 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 ROBO3Q96MS0 1386 aa24.03■■□□□ 1.44
CLN6-222ENST00000637667 RLFQ13129 1914 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 ADORA2AP29274 412 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 TDO2P48775 406 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 DPP9Q86TI2 863 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 CRBNQ96SW2 442 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 PRO3102Q9H379 93 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 MROH8Q9H579 483 aa24.02■■□□□ 1.44
CLN6-222ENST00000637667 APPP05067 770 aa24.01■■□□□ 1.43
CLN6-222ENST00000637667 MX1P20591 662 aa24.01■■□□□ 1.43
CLN6-222ENST00000637667 FSD1Q9BTV5 496 aa24.01■■□□□ 1.43
CLN6-222ENST00000637667 FBXO28Q9NVF7 368 aa24.01■■□□□ 1.43
CLN6-222ENST00000637667 RAD21O60216 631 aa24■■□□□ 1.43
CLN6-222ENST00000637667 IGHA2P01877 340 aa24■■□□□ 1.43
CLN6-222ENST00000637667 CYP2C19P33261 490 aa24■■□□□ 1.43
CLN6-222ENST00000637667 TMEM132BQ14DG7 1078 aa24■■□□□ 1.43
CLN6-222ENST00000637667 NCAPG2Q86XI2 1143 aa24■■□□□ 1.43
CLN6-222ENST00000637667 C7orf61Q8IZ16 206 aa24■■□□□ 1.43
CLN6-222ENST00000637667 ADAMTS5Q9UNA0 930 aa24■■□□□ 1.43
CLN6-222ENST00000637667 A0A0G2JMZ2 1700 aa24■■□□□ 1.43
CLN6-222ENST00000637667 PATL2C9JE40 543 aaKnown RBP23.99■■□□□ 1.43
CLN6-222ENST00000637667 FAM83BQ5T0W9 1011 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms