RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CCDC82Q8N4S0 544 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 SYMPKQ92797 1274 aaKnown RBP16.52■□□□□ 0.24
CLN6-215ENST00000636674 DESI2Q9BSY9 194 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 EP400Q96L91 3159 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 SOWAHDA6NJG2 315 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 PPP1R3GB7ZBB8 358 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 SNAP23O00161 211 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 SEC31AO94979 1220 aaKnown RBP16.52■□□□□ 0.23
CLN6-215ENST00000636674 CALM1P0DP23 149 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 CALM2P0DP24 149 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 CALM3P0DP25 149 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 PARP10Q53GL7 1025 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 TEX35Q5T0J7 233 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 CNGA4Q8IV77 575 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.23
CLN6-215ENST00000636674 MIGA1Q8NAN2 632 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.23
CLN6-215ENST00000636674 EPSTI1Q96J88 318 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 ARFGAP3Q9NP61 516 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.23
CLN6-215ENST00000636674 VPS54Q9P1Q0 977 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 LRP2BPQ9P2M1 347 aa16.52■□□□□ 0.23
CLN6-215ENST00000636674 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
CLN6-215ENST00000636674 CCDC151A5D8V7 595 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 FAM205CA6NFA0 338 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 SASH3O75995 380 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 CYP7A1P22680 504 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
CLN6-215ENST00000636674 TXLNAP40222 546 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 TUBB4BP68371 445 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 RBL2Q08999 1139 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 MTF1Q14872 753 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 FILIP1LQ4L180 1135 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 ZSCAN10Q96SZ4 725 aaPredicted RBP16.51■□□□□ 0.23
CLN6-215ENST00000636674 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
CLN6-215ENST00000636674 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
CLN6-215ENST00000636674 DDAH1O94760 285 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
CLN6-215ENST00000636674 KARSQ15046 597 aaKnown RBP16.5■□□□□ 0.23
CLN6-215ENST00000636674 BRD3Q15059 726 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 NPY5RQ15761 445 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 EARS2Q5JPH6 523 aaKnown RBP16.5■□□□□ 0.23
CLN6-215ENST00000636674 SRGAP1Q7Z6B7 1085 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 RIOK1Q9BRS2 568 aaKnown RBP16.5■□□□□ 0.23
CLN6-215ENST00000636674 BRIP1Q9BX63 1249 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 MAGEB6P1A0A0J9YX57 407 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 E2F4Q16254 413 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
CLN6-215ENST00000636674 LIMA1Q9UHB6 759 aaKnown RBP16.5■□□□□ 0.23
CLN6-215ENST00000636674 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
CLN6-215ENST00000636674 LRRC10BA6NIK2 292 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 KIF5CO60282 957 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 AFMP43652 599 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 TRAPPC10P48553 1259 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 TROAPQ12815 778 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 MSL3Q8N5Y2 521 aaKnown RBP16.49■□□□□ 0.23
CLN6-215ENST00000636674 CEP112Q8N8E3 955 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 HNRNPLLQ8WVV9 542 aaKnown RBP16.49■□□□□ 0.23
CLN6-215ENST00000636674 FUT8Q9BYC5 575 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 CDC23Q9UJX2 597 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 TTF2Q9UNY4 1162 aaKnown RBP16.49■□□□□ 0.23
CLN6-215ENST00000636674 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 MYH8P13535 1937 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 XDHP47989 1333 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
CLN6-215ENST00000636674 GYPCP04921 128 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 CHRNDQ07001 517 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 SPAG1Q07617 926 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 TRIM14Q14142 442 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
CLN6-215ENST00000636674 CDC5LQ99459 802 aaKnown RBP16.48■□□□□ 0.23
CLN6-215ENST00000636674 EPC1Q9H2F5 836 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 NTSR2O95665 410 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 KLHL10Q6JEL2 608 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 MSANTD4Q8NCY6 345 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
CLN6-215ENST00000636674 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 COL4A1P02462 1669 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 MAST2Q6P0Q8 1798 aa16.48■□□□□ 0.23
CLN6-215ENST00000636674 WNT7AO00755 349 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 USP5P45974 858 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 SMC1AQ14683 1233 aaKnown RBP16.47■□□□□ 0.23
CLN6-215ENST00000636674 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
CLN6-215ENST00000636674 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 TMTC1Q8IUR5 882 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 IQUBQ8NA54 791 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 RWDD2AQ9UIY3 292 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms