RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CMTR1Q8N1G2 835 aaKnown RBP20.43■□□□□ 0.86
SREK1-216ENST00000612404 FAM184AQ8NB25 1140 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 PHKBQ93100 1093 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 WRNIP1Q96S55 665 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 CTNND1O60716 968 aaKnown RBP20.42■□□□□ 0.86
SREK1-216ENST00000612404 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 SIAH1Q8IUQ4 282 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 INPP5BP32019 993 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 NTRK3Q16288 839 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 RASGRP2Q7LDG7 609 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 CDCA5Q96FF9 252 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 NMRK2Q9NPI5 230 aa20.42■□□□□ 0.86
SREK1-216ENST00000612404 CIZ1Q9ULV3 898 aaPredicted RBP20.42■□□□□ 0.86
SREK1-216ENST00000612404 PLEKHA8P1O95397 391 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 GRM4Q14833 912 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 MKL1Q969V6 931 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 ARHGEF10LQ9HCE6 1279 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 ATAD5Q96QE3 1844 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 USP17L5A8MUK1 530 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 IFNAR1P17181 557 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 NF2P35240 595 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 MAP1SQ66K74 1059 aaPredicted RBP20.41■□□□□ 0.86
SREK1-216ENST00000612404 ZKSCAN4Q969J2 545 aaPredicted RBP20.41■□□□□ 0.86
SREK1-216ENST00000612404 SLC26A6Q9BXS9 759 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 ORC3Q9UBD5 711 aaPredicted RBP20.41■□□□□ 0.86
SREK1-216ENST00000612404 MAD2L2Q9UI95 211 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 ZNF112Q9UJU3 913 aa20.41■□□□□ 0.86
SREK1-216ENST00000612404 PPP1R12BO60237 982 aaPredicted RBP20.4■□□□□ 0.86
SREK1-216ENST00000612404 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
SREK1-216ENST00000612404 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
SREK1-216ENST00000612404 USP17L2Q6R6M4 530 aa20.4■□□□□ 0.86
SREK1-216ENST00000612404 TMTC3Q6ZXV5 915 aa20.4■□□□□ 0.86
SREK1-216ENST00000612404 CCDC84Q86UT8 332 aaPredicted RBP20.4■□□□□ 0.86
SREK1-216ENST00000612404 KLRG1Q96E93 195 aa20.4■□□□□ 0.86
SREK1-216ENST00000612404 KIF3AQ9Y496 699 aa20.4■□□□□ 0.86
SREK1-216ENST00000612404 PDHBP11177 359 aa20.39■□□□□ 0.86
SREK1-216ENST00000612404 SSRP1Q08945 709 aaKnown RBP20.39■□□□□ 0.86
SREK1-216ENST00000612404 PKP1Q13835 747 aa20.39■□□□□ 0.86
SREK1-216ENST00000612404 LARP1BQ659C4 914 aaKnown RBP20.39■□□□□ 0.86
SREK1-216ENST00000612404 STAG2Q8N3U4 1231 aa20.39■□□□□ 0.86
SREK1-216ENST00000612404 USP2O75604 605 aaPredicted RBP20.39■□□□□ 0.85
SREK1-216ENST00000612404 FDPSP14324 419 aaKnown RBP20.39■□□□□ 0.85
SREK1-216ENST00000612404 SYT1P21579 422 aa20.39■□□□□ 0.85
SREK1-216ENST00000612404 ECE1P42892 770 aa20.39■□□□□ 0.85
SREK1-216ENST00000612404 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.85
SREK1-216ENST00000612404 ACER1Q8TDN7 264 aa20.39■□□□□ 0.85
SREK1-216ENST00000612404 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
SREK1-216ENST00000612404 A0A1W2PRG0 241 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 PDCP20941 246 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 GNAQP50148 359 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 NUCB2P80303 420 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 SCYL3Q8IZE3 742 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 GINM1Q9NU53 330 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 FRMPD2Q68DX3 1309 aaPredicted RBP20.38■□□□□ 0.85
SREK1-216ENST00000612404 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
SREK1-216ENST00000612404 FOSBP53539 338 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 LDHDQ86WU2 507 aa20.38■□□□□ 0.85
SREK1-216ENST00000612404 SRBD1Q8N5C6 995 aaKnown RBP20.38■□□□□ 0.85
SREK1-216ENST00000612404 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
SREK1-216ENST00000612404 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
SREK1-216ENST00000612404 KLRF2D3W0D1 207 aa20.37■□□□□ 0.85
SREK1-216ENST00000612404 AKAP17AQ02040 695 aaKnown RBP20.37■□□□□ 0.85
SREK1-216ENST00000612404 TTLL12Q14166 644 aaPredicted RBP20.37■□□□□ 0.85
SREK1-216ENST00000612404 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
SREK1-216ENST00000612404 FOXD4L5Q5VV16 416 aaPredicted RBP20.37■□□□□ 0.85
SREK1-216ENST00000612404 SLFN13Q68D06 897 aa20.37■□□□□ 0.85
SREK1-216ENST00000612404 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
SREK1-216ENST00000612404 FOXD4L4Q8WXT5 416 aaPredicted RBP20.37■□□□□ 0.85
SREK1-216ENST00000612404 DOCK1Q14185 1865 aa20.37■□□□□ 0.85
SREK1-216ENST00000612404 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
SREK1-216ENST00000612404 VPS37CA5D8V6 355 aaPredicted RBP20.36■□□□□ 0.85
SREK1-216ENST00000612404 F5H6K3 240 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 STX6O43752 255 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 SNHG28P0DPA3 235 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 KLRC3Q07444 240 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 ZYXQ15942 572 aaKnown RBP20.36■□□□□ 0.85
SREK1-216ENST00000612404 GMCL1P1Q8NEA9 526 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 SH2D4AQ9H788 454 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 GPCPD1Q9NPB8 672 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 TMX2Q9Y320 296 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 SLC1A4P43007 532 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 FUT2Q10981 343 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 ASPRV1Q53RT3 343 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.36■□□□□ 0.85
SREK1-216ENST00000612404 PIBF1Q8WXW3 757 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 FEZ1Q99689 392 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
SREK1-216ENST00000612404 UBE2Q2LH0YL09 131 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 TRAF5O00463 557 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 IREB2P48200 963 aaKnown RBP20.35■□□□□ 0.85
SREK1-216ENST00000612404 KCTD1Q719H9 257 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 SPICE1Q8N0Z3 855 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 LZTS2Q9BRK4 669 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 RNF26Q9BY78 433 aaPredicted RBP20.35■□□□□ 0.85
SREK1-216ENST00000612404 SYNPO2Q9UMS6 1093 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 V9GY48 417 aaPredicted RBP20.35■□□□□ 0.85
SREK1-216ENST00000612404 STK36Q9NRP7 1315 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms