RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, human

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSPG5-205	ENST00000610462	GNAQ	P50148	359 aa		32.13	■■■□□ 2.73
CSPG5-205	ENST00000610462	NPR1	P16066	1061 aa		32.12	■■■□□ 2.73
CSPG5-205	ENST00000610462	NLRP5	P59047	1200 aa		32.12	■■■□□ 2.73
CSPG5-205	ENST00000610462	TERF1	P54274	439 aa		32.12	■■■□□ 2.73
CSPG5-205	ENST00000610462	GTF2I	P78347	998 aa		32.12	■■■□□ 2.73
CSPG5-205	ENST00000610462	MDM2	Q00987	491 aa	Predicted RBP	32.12	■■■□□ 2.73
CSPG5-205	ENST00000610462	CSRNP2	Q9H175	543 aa		32.12	■■■□□ 2.73
CSPG5-205	ENST00000610462	CDK8	P49336	464 aa		32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	SNED1	Q8TER0	1413 aa		32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	RIMBP2	O15034	1052 aa		32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	TPM4	P67936	248 aa		32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	C17orf53	Q8N3J3	647 aa	Predicted RBP	32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	MAD2L2	Q9UI95	211 aa		32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	R3HCC1	Q9Y3T6	440 aa	Known RBP	32.11	■■■□□ 2.73
CSPG5-205	ENST00000610462	IKBKB	O14920	756 aa		32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	POLR2D	O15514	142 aa	Known RBP	32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	ISM2	Q6H9L7	571 aa		32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	STAG2	Q8N3U4	1231 aa		32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	SH3GLB2	Q9NR46	395 aa		32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	SUGT1	Q9Y2Z0	365 aa		32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	QSER1	Q2KHR3	1735 aa		32.1	■■■□□ 2.73
CSPG5-205	ENST00000610462	APBA3	O96018	575 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	NCAPH	Q15003	741 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	PCDHA5	Q9Y5H7	936 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	COL11A2	P13942	1736 aa	Predicted RBP	32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	VEGFA	P15692	232 aa	Predicted RBP	32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	CCDC144B	Q3MJ40	725 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	NOM1	Q5C9Z4	860 aa	Known RBP	32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	TTC38	Q5R3I4	469 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	FLAD1	Q8NFF5	587 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	TMEM47	Q9BQJ4	181 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	SERTAD1	Q9UHV2	236 aa		32.09	■■■□□ 2.73
CSPG5-205	ENST00000610462	CALML3	P27482	149 aa		32.08	■■■□□ 2.73
CSPG5-205	ENST00000610462	ALDH1B1	P30837	517 aa		32.08	■■■□□ 2.73
CSPG5-205	ENST00000610462	FERMT2	Q96AC1	680 aa		32.08	■■■□□ 2.73
CSPG5-205	ENST00000610462	EYA3	Q99504	573 aa		32.08	■■■□□ 2.73
CSPG5-205	ENST00000610462	DAGLA	Q9Y4D2	1042 aa		32.08	■■■□□ 2.73
CSPG5-205	ENST00000610462	PDE6B	P35913	854 aa		32.07	■■■□□ 2.73
CSPG5-205	ENST00000610462	TRAPPC10	P48553	1259 aa		32.07	■■■□□ 2.73
CSPG5-205	ENST00000610462	NEDD1	Q8NHV4	660 aa		32.07	■■■□□ 2.73
CSPG5-205	ENST00000610462	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.07	■■■□□ 2.73
CSPG5-205	ENST00000610462	WNT7A	O00755	349 aa		32.07	■■■□□ 2.72
CSPG5-205	ENST00000610462	FOXN1	O15353	648 aa		32.07	■■■□□ 2.72
CSPG5-205	ENST00000610462	POSTN	Q15063	836 aa		32.07	■■■□□ 2.72
CSPG5-205	ENST00000610462	STX8	Q9UNK0	236 aa		32.07	■■■□□ 2.72
CSPG5-205	ENST00000610462	ZNF174	Q15697	407 aa		32.06	■■■□□ 2.72
CSPG5-205	ENST00000610462	ZNF772	Q68DY9	489 aa	Predicted RBP	32.06	■■■□□ 2.72
CSPG5-205	ENST00000610462	KANK3	Q6NY19	840 aa		32.06	■■■□□ 2.72
CSPG5-205	ENST00000610462	USP49	Q70CQ1	688 aa		32.06	■■■□□ 2.72
CSPG5-205	ENST00000610462	ACTN4	O43707	911 aa	Known RBP	32.05	■■■□□ 2.72
CSPG5-205	ENST00000610462	TPM2	P07951	284 aa		32.05	■■■□□ 2.72
CSPG5-205	ENST00000610462	LRMP	Q12912	555 aa		32.05	■■■□□ 2.72
CSPG5-205	ENST00000610462	OLFM4	Q6UX06	510 aa		32.05	■■■□□ 2.72
CSPG5-205	ENST00000610462	PARP3	Q9Y6F1	533 aa		32.05	■■■□□ 2.72
CSPG5-205	ENST00000610462	PALM3	A6NDB9	673 aa	Predicted RBP	32.04	■■■□□ 2.72
CSPG5-205	ENST00000610462	PIK3AP1	Q6ZUJ8	805 aa		32.04	■■■□□ 2.72
CSPG5-205	ENST00000610462	LZTS2	Q9BRK4	669 aa		32.04	■■■□□ 2.72
CSPG5-205	ENST00000610462	ATP2C1	P98194	919 aa	Predicted RBP	32.04	■■■□□ 2.72
CSPG5-205	ENST00000610462	NT5DC1	Q5TFE4	455 aa		32.04	■■■□□ 2.72
CSPG5-205	ENST00000610462	BLID	Q8IZY5	108 aa		32.04	■■■□□ 2.72
CSPG5-205	ENST00000610462	MMP10	P09238	476 aa		32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	DPP8	Q6V1X1	898 aa	Predicted RBP	32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	CACTIN	Q8WUQ7	758 aa	Known RBP	32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	SLC35G1	Q2M3R5	365 aa		32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	DNTTIP2	Q5QJE6	756 aa	Known RBP	32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	MASTL	Q96GX5	879 aa		32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	PCDHA4	Q9UN74	947 aa		32.03	■■■□□ 2.72
CSPG5-205	ENST00000610462	SARS	P49591	514 aa	Known RBP	32.02	■■■□□ 2.72
CSPG5-205	ENST00000610462	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.02	■■■□□ 2.72
CSPG5-205	ENST00000610462	PDILT	Q8N807	584 aa		32.02	■■■□□ 2.72
CSPG5-205	ENST00000610462	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	32.02	■■■□□ 2.72
CSPG5-205	ENST00000610462	MAN1B1	Q9UKM7	699 aa		32.02	■■■□□ 2.72
CSPG5-205	ENST00000610462	ADAMTS3	O15072	1205 aa		32.01	■■■□□ 2.72
CSPG5-205	ENST00000610462	NEMF	O60524	1076 aa		32.01	■■■□□ 2.72
CSPG5-205	ENST00000610462	PRR29	P0C7W0	189 aa		32.01	■■■□□ 2.72
CSPG5-205	ENST00000610462	MYL5	Q02045	173 aa		32.01	■■■□□ 2.72
CSPG5-205	ENST00000610462	PTGDR	Q13258	359 aa		32.01	■■■□□ 2.72
CSPG5-205	ENST00000610462	CERS5	Q8N5B7	392 aa		32.01	■■■□□ 2.72
CSPG5-205	ENST00000610462	CYTH3	O43739	400 aa		32.01	■■■□□ 2.71
CSPG5-205	ENST00000610462	EPSTI1	Q96J88	318 aa		32.01	■■■□□ 2.71
CSPG5-205	ENST00000610462	LRRC8A	Q8IWT6	810 aa		32	■■■□□ 2.71
CSPG5-205	ENST00000610462	SMARCE1	Q969G3	411 aa		32	■■■□□ 2.71
CSPG5-205	ENST00000610462	TMX4	Q9H1E5	349 aa	Predicted RBP	32	■■■□□ 2.71
CSPG5-205	ENST00000610462	IFNK	Q9P0W0	207 aa		32	■■■□□ 2.71
CSPG5-205	ENST00000610462	MYH8	P13535	1937 aa		32	■■■□□ 2.71
CSPG5-205	ENST00000610462	BMP6	P22004	513 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	SYMPK	Q92797	1274 aa	Known RBP	31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	CCDC34	Q96HJ3	373 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	XPO4	Q9C0E2	1151 aa	Known RBP	31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	HSD3B7	Q9H2F3	369 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	MTMR7	Q9Y216	660 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	TOP1	P11387	765 aa	Known RBP	31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	NOV	P48745	357 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	FAM177A1	Q8N128	213 aa	Predicted RBP	31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	TRIML1	Q8N9V2	468 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	CCDC148	Q8NFR7	591 aa		31.99	■■■□□ 2.71
CSPG5-205	ENST00000610462	SMC2	O95347	1197 aa		31.98	■■■□□ 2.71
CSPG5-205	ENST00000610462	DOK7	Q18PE1	504 aa		31.98	■■■□□ 2.71
CSPG5-205	ENST00000610462	WWC2	Q6AWC2	1192 aa		31.98	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms