RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CREB3L3Q68CJ9 461 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 STOX1Q6ZVD7 989 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 GMCL1P1Q8NEA9 526 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
LTBP4-228ENST00000600499 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 CLIP2Q9UDT6 1046 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 PNMA3Q9UL41 463 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 TAF6LQ9Y6J9 622 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
LTBP4-228ENST00000600499 KDM4AO75164 1064 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
LTBP4-228ENST00000600499 RCSD1Q6JBY9 416 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 C17orf99Q6UX52 265 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 LBX2Q6XYB7 198 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 GOPCQ9HD26 462 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 PRDM10Q9NQV6 1147 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
LTBP4-228ENST00000600499 B4E1Z4 1266 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 GPR25O00155 361 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
LTBP4-228ENST00000600499 NMT2O60551 498 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 BCRP11274 1271 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 RNF20Q5VTR2 975 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 NCOA7Q8NI08 942 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 ASCC2Q9H1I8 757 aaPredicted RBP17.23■□□□□ 0.35
LTBP4-228ENST00000600499 RLFQ13129 1914 aa17.23■□□□□ 0.35
LTBP4-228ENST00000600499 F5H6K3 240 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
LTBP4-228ENST00000600499 CYP2C8P10632 490 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 OSBPP22059 807 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 HSPA4P34932 840 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 KLRC3Q07444 240 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 TRDNQ13061 729 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
LTBP4-228ENST00000600499 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 MB21D2Q8IYB1 491 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-228ENST00000600499 GTF3C2Q8WUA4 911 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-228ENST00000600499 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
LTBP4-228ENST00000600499 MYPNQ86TC9 1320 aa17.21■□□□□ 0.35
LTBP4-228ENST00000600499 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
LTBP4-228ENST00000600499 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-228ENST00000600499 LBX1P52954 281 aa17.21■□□□□ 0.35
LTBP4-228ENST00000600499 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-228ENST00000600499 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
LTBP4-228ENST00000600499 TMEM47Q9BQJ4 181 aa17.21■□□□□ 0.35
LTBP4-228ENST00000600499 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-228ENST00000600499 TSKSQ9UJT2 592 aa17.21■□□□□ 0.35
LTBP4-228ENST00000600499 PARP14Q460N5 1801 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 NDUFB10O96000 172 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 SEC23AQ15436 765 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 POTEEQ6S8J3 1075 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 GMCL1Q96IK5 515 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 MORF4L1Q9UBU8 362 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 ADAMTS5Q9UNA0 930 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 STX8Q9UNK0 236 aa17.2■□□□□ 0.34
LTBP4-228ENST00000600499 PLA2G6O60733 806 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 FKTNO75072 461 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 SNHG28P0DPA3 235 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 ANTXR2P58335 489 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 HERVK_113P62684 666 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 IRX3P78415 501 aaPredicted RBP17.19■□□□□ 0.34
LTBP4-228ENST00000600499 SP3Q02447 781 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 COG2Q14746 738 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 ENAHQ8N8S7 591 aaPredicted RBP17.19■□□□□ 0.34
LTBP4-228ENST00000600499 ZNF296Q8WUU4 475 aaPredicted RBP17.19■□□□□ 0.34
LTBP4-228ENST00000600499 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
LTBP4-228ENST00000600499 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
LTBP4-228ENST00000600499 ZKSCAN1P17029 563 aaPredicted RBP17.18■□□□□ 0.34
LTBP4-228ENST00000600499 DSG3P32926 999 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 KRT32Q14532 448 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 SLFN13Q68D06 897 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 RALYLQ86SE5 291 aaKnown RBP17.18■□□□□ 0.34
LTBP4-228ENST00000600499 SPICE1Q8N0Z3 855 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 LRRC47Q8N1G4 583 aaKnown RBP17.18■□□□□ 0.34
LTBP4-228ENST00000600499 TNKSO95271 1327 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 WDR19Q8NEZ3 1342 aa17.18■□□□□ 0.34
LTBP4-228ENST00000600499 CASP8AP2Q9UKL3 1982 aa17.17■□□□□ 0.34
LTBP4-228ENST00000600499 A0A0G2JMZ2 1700 aa17.17■□□□□ 0.34
LTBP4-228ENST00000600499 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
LTBP4-228ENST00000600499 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
LTBP4-228ENST00000600499 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
LTBP4-228ENST00000600499 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
LTBP4-228ENST00000600499 IL17RAQ96F46 866 aa17.17■□□□□ 0.34
LTBP4-228ENST00000600499 ZKSCAN3Q9BRR0 538 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms