RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 C12orf60Q5U649 245 aa25.68■■□□□ 1.7
SYMPK-208ENST00000598059 APBA2Q99767 749 aa25.68■■□□□ 1.7
SYMPK-208ENST00000598059 RLFQ13129 1914 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 GLRX3O76003 335 aaKnown RBP25.67■■□□□ 1.7
SYMPK-208ENST00000598059 IGHDP01880 384 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 MNX1P50219 401 aaPredicted RBP25.67■■□□□ 1.7
SYMPK-208ENST00000598059 CACNB2Q08289 660 aaPredicted RBP25.67■■□□□ 1.7
SYMPK-208ENST00000598059 MAP2K5Q13163 448 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 ZSCAN25Q6NSZ9 544 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 PUS7LQ9H0K6 701 aaKnown RBP25.67■■□□□ 1.7
SYMPK-208ENST00000598059 DCTPP1Q9H773 170 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 ECHDC1Q9NTX5 307 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 RBM27Q9P2N5 1060 aaKnown RBP25.67■■□□□ 1.7
SYMPK-208ENST00000598059 OGDHLQ9ULD0 1010 aa25.67■■□□□ 1.7
SYMPK-208ENST00000598059 CYP2D7A0A087X1C5 515 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 USP17L12C9JPN9 530 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 USP17L21D6R901 530 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 SMIM22K7EJ46 135 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 AKR1B1P15121 316 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 COG2Q14746 738 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 SIAH1Q8IUQ4 282 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 SLC4A4Q9Y6R1 1079 aa25.66■■□□□ 1.7
SYMPK-208ENST00000598059 PTPREP23469 700 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 CDK8P49336 464 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 KIAA1755Q5JYT7 1200 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 WDR78Q5VTH9 848 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 AMOTL1Q8IY63 956 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 DDRGK1Q96HY6 314 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 CCDC17Q96LX7 622 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 NBPF3Q9H094 633 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 PRO3102Q9H379 93 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 HOXC10Q9NYD6 342 aa25.65■■□□□ 1.7
SYMPK-208ENST00000598059 SLC15A5A6NIM6 579 aa25.64■■□□□ 1.7
SYMPK-208ENST00000598059 ICA1Q05084 483 aa25.64■■□□□ 1.7
SYMPK-208ENST00000598059 C16orf86Q6ZW13 317 aa25.64■■□□□ 1.7
SYMPK-208ENST00000598059 CLEC10AQ8IUN9 316 aa25.64■■□□□ 1.7
SYMPK-208ENST00000598059 TANGO6Q9C0B7 1094 aa25.64■■□□□ 1.7
SYMPK-208ENST00000598059 TMX2Q9Y320 296 aa25.64■■□□□ 1.7
SYMPK-208ENST00000598059 CCND3P30281 292 aaPredicted RBP25.63■■□□□ 1.69
SYMPK-208ENST00000598059 GRB14Q14449 540 aa25.63■■□□□ 1.69
SYMPK-208ENST00000598059 CTR9Q6PD62 1173 aa25.63■■□□□ 1.69
SYMPK-208ENST00000598059 LPAR1Q92633 364 aa25.63■■□□□ 1.69
SYMPK-208ENST00000598059 ARHGEF10LQ9HCE6 1279 aa25.63■■□□□ 1.69
SYMPK-208ENST00000598059 PPP4R2Q9NY27 417 aa25.63■■□□□ 1.69
SYMPK-208ENST00000598059 IVNS1ABPQ9Y6Y0 642 aa25.63■■□□□ 1.69
SYMPK-208ENST00000598059 GPATCH3Q96I76 525 aa25.62■■□□□ 1.69
SYMPK-208ENST00000598059 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
SYMPK-208ENST00000598059 SH2D4AQ9H788 454 aa25.62■■□□□ 1.69
SYMPK-208ENST00000598059 FLRT1Q9NZU1 646 aa25.62■■□□□ 1.69
SYMPK-208ENST00000598059 A0A0G2JMZ2 1700 aa25.62■■□□□ 1.69
SYMPK-208ENST00000598059 HOXC6P09630 235 aa25.61■■□□□ 1.69
SYMPK-208ENST00000598059 LHX8Q68G74 356 aa25.61■■□□□ 1.69
SYMPK-208ENST00000598059 SPICE1Q8N0Z3 855 aa25.61■■□□□ 1.69
SYMPK-208ENST00000598059 KBTBD3Q8NAB2 608 aa25.61■■□□□ 1.69
SYMPK-208ENST00000598059 STRBPQ96SI9 672 aaKnown RBP25.61■■□□□ 1.69
SYMPK-208ENST00000598059 MOV10L1Q9BXT6 1211 aaKnown RBP25.61■■□□□ 1.69
SYMPK-208ENST00000598059 C11orf49Q9H6J7 331 aa25.61■■□□□ 1.69
SYMPK-208ENST00000598059 VCPKMTQ9H867 229 aa25.61■■□□□ 1.69
SYMPK-208ENST00000598059 TSHZ3Q63HK5 1081 aa25.6■■□□□ 1.69
SYMPK-208ENST00000598059 SPATC1LQ9H0A9 340 aa25.6■■□□□ 1.69
SYMPK-208ENST00000598059 PARP14Q460N5 1801 aa25.6■■□□□ 1.69
SYMPK-208ENST00000598059 DSG3P32926 999 aa25.59■■□□□ 1.69
SYMPK-208ENST00000598059 MFSD14CQ5VZR4 134 aa25.59■■□□□ 1.69
SYMPK-208ENST00000598059 SMC5Q8IY18 1101 aa25.59■■□□□ 1.69
SYMPK-208ENST00000598059 MB21D1Q8N884 522 aa25.59■■□□□ 1.69
SYMPK-208ENST00000598059 ARPP21Q9UBL0 812 aaPredicted RBP25.59■■□□□ 1.69
SYMPK-208ENST00000598059 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
SYMPK-208ENST00000598059 FLOT1O75955 427 aa25.58■■□□□ 1.69
SYMPK-208ENST00000598059 B4GALNT3Q6L9W6 998 aa25.58■■□□□ 1.69
SYMPK-208ENST00000598059 NPLOC4Q8TAT6 608 aa25.58■■□□□ 1.69
SYMPK-208ENST00000598059 KANSL2Q9H9L4 492 aa25.58■■□□□ 1.69
SYMPK-208ENST00000598059 FRMPD3Q5JV73 1810 aa25.58■■□□□ 1.68
SYMPK-208ENST00000598059 LAMA2P24043 3122 aaKnown RBP25.57■■□□□ 1.68
SYMPK-208ENST00000598059 GSG1L2A8MUP6 293 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 WDR46O15213 610 aaKnown RBP25.57■■□□□ 1.68
SYMPK-208ENST00000598059 STRNO43815 780 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 EEF2P13639 858 aaKnown RBP25.57■■□□□ 1.68
SYMPK-208ENST00000598059 ATP2B2Q01814 1243 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 C7orf61Q8IZ16 206 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 SHCBP1Q8NEM2 672 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 APPBP2Q92624 585 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 OSBP2Q969R2 916 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 CCDC136Q96JN2 1154 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 ZNF236Q9UL36 1845 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 PFASO15067 1338 aa25.57■■□□□ 1.68
SYMPK-208ENST00000598059 IGHA2P01877 340 aa25.56■■□□□ 1.68
SYMPK-208ENST00000598059 ERCC3P19447 782 aa25.56■■□□□ 1.68
SYMPK-208ENST00000598059 ADORA2AP29274 412 aa25.56■■□□□ 1.68
SYMPK-208ENST00000598059 SBK1Q52WX2 424 aa25.56■■□□□ 1.68
SYMPK-208ENST00000598059 GIMAP6Q6P9H5 292 aa25.56■■□□□ 1.68
SYMPK-208ENST00000598059 ATG4CQ96DT6 458 aa25.56■■□□□ 1.68
SYMPK-208ENST00000598059 GREB1LQ9C091 1923 aaPredicted RBP25.55■■□□□ 1.68
SYMPK-208ENST00000598059 RNF113AO15541 343 aaKnown RBP25.55■■□□□ 1.68
SYMPK-208ENST00000598059 COL6A1P12109 1028 aa25.55■■□□□ 1.68
SYMPK-208ENST00000598059 DPP9Q86TI2 863 aa25.55■■□□□ 1.68
SYMPK-208ENST00000598059 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.55■■□□□ 1.68
SYMPK-208ENST00000598059 STAP2Q9UGK3 403 aa25.55■■□□□ 1.68
SYMPK-208ENST00000598059 COL11A1P12107 1806 aaPredicted RBP25.55■■□□□ 1.68
SYMPK-208ENST00000598059 ZFYP08048 801 aaPredicted RBP25.54■■□□□ 1.68
SYMPK-208ENST00000598059 CYP2C19P33261 490 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms