RNA–Protein interactions for RNA: ENST00000590342.1

DUSP3-202, Transcript of dual specificity phosphatase 3, humanhuman

TSL 1 (best)

Gene DUSP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-202ENST00000590342 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
DUSP3-202ENST00000590342 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
DUSP3-202ENST00000590342 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
DUSP3-202ENST00000590342 NCOA5Q9HCD5 579 aaKnown RBP16.27■□□□□ 0.2
DUSP3-202ENST00000590342 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
DUSP3-202ENST00000590342 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
DUSP3-202ENST00000590342 ICA1Q05084 483 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 GPT2Q8TD30 523 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 WRNIP1Q96S55 665 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 ATP6V1DQ9Y5K8 247 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 CTNND1O60716 968 aaKnown RBP16.26■□□□□ 0.19
DUSP3-202ENST00000590342 ASNSP08243 561 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
DUSP3-202ENST00000590342 SYT1P21579 422 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 INPP5BP32019 993 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 NF2P35240 595 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 TROAPQ12815 778 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 ZNF112Q9UJU3 913 aa16.26■□□□□ 0.19
DUSP3-202ENST00000590342 PPP1R12BO60237 982 aaPredicted RBP16.25■□□□□ 0.19
DUSP3-202ENST00000590342 DDAH1O94760 285 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
DUSP3-202ENST00000590342 GJB2P29033 226 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 RCAN1P53805 252 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
DUSP3-202ENST00000590342 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 DTNBO60941 627 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 USP2O75604 605 aaPredicted RBP16.25■□□□□ 0.19
DUSP3-202ENST00000590342 CALM1P0DP23 149 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 CALM2P0DP24 149 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 CALM3P0DP25 149 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 SIAH1Q8IUQ4 282 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 LRRC47Q8N1G4 583 aaKnown RBP16.25■□□□□ 0.19
DUSP3-202ENST00000590342 FANCBQ8NB91 859 aa16.25■□□□□ 0.19
DUSP3-202ENST00000590342 CDC27P30260 824 aa16.24■□□□□ 0.19
DUSP3-202ENST00000590342 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
DUSP3-202ENST00000590342 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
DUSP3-202ENST00000590342 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
DUSP3-202ENST00000590342 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 TRAF5O00463 557 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 CPLX1O14810 134 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 RTN1Q16799 776 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 MKL1Q969V6 931 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 FAM217BQ9NTX9 383 aaPredicted RBP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 GINM1Q9NU53 330 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 NID2Q14112 1375 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 ATAD5Q96QE3 1844 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 F13A1P00488 732 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
DUSP3-202ENST00000590342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 CTCFLQ8NI51 663 aaPredicted RBP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 SYAP1Q96A49 352 aaPredicted RBP16.23■□□□□ 0.19
DUSP3-202ENST00000590342 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
DUSP3-202ENST00000590342 TTLL12Q14166 644 aaPredicted RBP16.22■□□□□ 0.19
DUSP3-202ENST00000590342 TMEM87AQ8NBN3 555 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 ARHGEF10LQ9HCE6 1279 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 A0A1W2PRG0 241 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 CTDNEP1O95476 244 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 IREB2P48200 963 aaKnown RBP16.22■□□□□ 0.19
DUSP3-202ENST00000590342 PPP2R5BQ15173 497 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 ACER1Q8TDN7 264 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 LLPHQ9BRT6 129 aaKnown RBP16.22■□□□□ 0.19
DUSP3-202ENST00000590342 ZNF408Q9H9D4 720 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 PICK1Q9NRD5 415 aa16.22■□□□□ 0.19
DUSP3-202ENST00000590342 DOCK1Q14185 1865 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 RAD21O60216 631 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 PPFIA3O75145 1194 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 PDCP20941 246 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 KIF5BP33176 963 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 ECE1P42892 770 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 FOXD4L6Q3SYB3 417 aaPredicted RBP16.21■□□□□ 0.19
DUSP3-202ENST00000590342 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.19
DUSP3-202ENST00000590342 FOXD4L3Q6VB84 417 aaPredicted RBP16.21■□□□□ 0.19
DUSP3-202ENST00000590342 RASGRP2Q7LDG7 609 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
DUSP3-202ENST00000590342 MAP3K14Q99558 947 aa16.21■□□□□ 0.19
DUSP3-202ENST00000590342 RBM28Q9NW13 759 aaKnown RBP16.21■□□□□ 0.19
DUSP3-202ENST00000590342 JAK2O60674 1132 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 GRM4Q14833 912 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 NOL9Q5SY16 702 aaKnown RBP16.2■□□□□ 0.18
DUSP3-202ENST00000590342 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 MOB2Q70IA6 237 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
DUSP3-202ENST00000590342 PTPDC1A2A3K4 754 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 PDHBP11177 359 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 PTPRAP18433 802 aa16.2■□□□□ 0.18
DUSP3-202ENST00000590342 NASPP49321 788 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms