RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SPATC1LQ9H0A9 340 aa14.45□□□□□ -0.1
BRCA1-225ENST00000586385 IL1RAPL2Q9NP60 686 aa14.45□□□□□ -0.1
BRCA1-225ENST00000586385 CABP5Q9NP86 173 aa14.45□□□□□ -0.1
BRCA1-225ENST00000586385 IVNS1ABPQ9Y6Y0 642 aa14.45□□□□□ -0.1
BRCA1-225ENST00000586385 RLFQ13129 1914 aa14.45□□□□□ -0.1
BRCA1-225ENST00000586385 ERCC3P19447 782 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 COG2Q14746 738 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 PRAMEF19Q5SWL8 479 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 TMED8Q6PL24 325 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-225ENST00000586385 LCORLQ8N3X6 602 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 DYNLL2Q96FJ2 89 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 DCP1AQ9NPI6 582 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-225ENST00000586385 MCM9Q9NXL9 1143 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 A0A0G2JMZ2 1700 aa14.44□□□□□ -0.1
BRCA1-225ENST00000586385 ZNF532Q9HCE3 1301 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 ZNF236Q9UL36 1845 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 CHGBP05060 677 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-225ENST00000586385 SNX17Q15036 470 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 C9orf50Q5SZB4 431 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 SLC9C2Q5TAH2 1124 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 SLC39A5Q6ZMH5 540 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 FTSJ3Q8IY81 847 aaKnown RBP14.43□□□□□ -0.1
BRCA1-225ENST00000586385 SHCBP1Q8NEM2 672 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 ATG4CQ96DT6 458 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
BRCA1-225ENST00000586385 COL25A1Q9BXS0 654 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-225ENST00000586385 LAMA2P24043 3122 aaKnown RBP14.43□□□□□ -0.1
BRCA1-225ENST00000586385 SEPT4O43236 478 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 PRKAB2O43741 272 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 STRNO43815 780 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 AKR1B1P15121 316 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 DSG3P32926 999 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 SHHQ15465 462 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 SH3RF1Q7Z6J0 888 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 DPP9Q86TI2 863 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 RHPN1Q8TCX5 695 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 PANK1Q8TE04 598 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 LBHD1Q9BQE6 289 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-225ENST00000586385 CRNKL1Q9BZJ0 848 aaKnown RBP14.42□□□□□ -0.1
BRCA1-225ENST00000586385 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 HOXC10Q9NYD6 342 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 ATP11BQ9Y2G3 1177 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 LTBP2Q14767 1821 aa14.42□□□□□ -0.1
BRCA1-225ENST00000586385 TRIM43BA6NCK2 446 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 GOLIM4O00461 696 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 MPHOSPH10O00566 681 aaKnown RBP14.41□□□□□ -0.1
BRCA1-225ENST00000586385 LRRC41Q15345 812 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 TRIM60Q495X7 471 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 FAM47AQ5JRC9 791 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 TMEM179Q6ZVK1 233 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 ERC1Q8IUD2 1116 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 SIRT2Q8IXJ6 389 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 SPICE1Q8N0Z3 855 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 TRIM43Q96BQ3 446 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-225ENST00000586385 MAML3Q96JK9 1138 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 ARMT1Q9H993 441 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 PDLIM7Q9NR12 457 aa14.41□□□□□ -0.1
BRCA1-225ENST00000586385 UNC80Q8N2C7 3258 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 NAV1Q8NEY1 1877 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 CYP2D7A0A087X1C5 515 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 ITGB8P26012 769 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-225ENST00000586385 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.1
BRCA1-225ENST00000586385 ABRAQ8N0Z2 381 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 MB21D1Q8N884 522 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 ADAMTS5Q9UNA0 930 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 TMX2Q9Y320 296 aa14.4□□□□□ -0.1
BRCA1-225ENST00000586385 TAL1P17542 331 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-225ENST00000586385 ADCYAP1R1P41586 468 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 NCAPG2Q86XI2 1143 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 ARRDC4Q8NCT1 418 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.39□□□□□ -0.11
BRCA1-225ENST00000586385 BADQ92934 168 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 FERMT2Q96AC1 680 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 DNAJC2Q99543 621 aaKnown RBP14.39□□□□□ -0.11
BRCA1-225ENST00000586385 CDX2Q99626 313 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-225ENST00000586385 TTYH1Q9H313 450 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-225ENST00000586385 MROH8Q9H579 483 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
BRCA1-225ENST00000586385 FLOT1O75955 427 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 MBD4O95243 580 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 ADD2P35612 726 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 EPHB4P54760 987 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 ICA1Q05084 483 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 PLS1Q14651 629 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 C1orf53Q5VUE5 145 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 REPS2Q8NFH8 660 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 PRDM5Q9NQX1 630 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-225ENST00000586385 SWAP70Q9UH65 585 aa14.38□□□□□ -0.11
BRCA1-225ENST00000586385 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 APBB1O00213 710 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 PGK2P07205 417 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 CDK8P49336 464 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 TLE2Q04725 743 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 ZNF697Q5TEC3 545 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 C12orf60Q5U649 245 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms