RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ALX1Q15699 326 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 VCPKMTQ9H867 229 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 TXNRD2Q9NNW7 524 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 GJD2Q9UKL4 321 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 SYNPO2Q9UMS6 1093 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 GABRQQ9UN88 632 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 ZMYM6O95789 1325 aa11.82□□□□□ -0.52
SKA2-208ENST00000583927 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 WDR46O15213 610 aaKnown RBP11.81□□□□□ -0.52
SKA2-208ENST00000583927 FOXP2O15409 715 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
SKA2-208ENST00000583927 COG2Q14746 738 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
SKA2-208ENST00000583927 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 SH3TC2Q8TF17 1288 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
SKA2-208ENST00000583927 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 RPAP3Q9H6T3 665 aaPredicted RBP11.81□□□□□ -0.52
SKA2-208ENST00000583927 MKNK2Q9HBH9 465 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 NYAP2Q9P242 653 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 ANAPC4Q9UJX5 808 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 FRMPD3Q5JV73 1810 aa11.81□□□□□ -0.52
SKA2-208ENST00000583927 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
SKA2-208ENST00000583927 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 ADCY3O60266 1144 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 CNMDO75829 334 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 APPP05067 770 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
SKA2-208ENST00000583927 EEF2P13639 858 aaKnown RBP11.8□□□□□ -0.52
SKA2-208ENST00000583927 UBXN2AP68543 259 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 CCNA1P78396 465 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 PDE4BQ07343 736 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 Q3C1V9 767 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 MCMDC2Q4G0Z9 681 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 SOCS4Q8WXH5 440 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 USP6NLQ92738 828 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 MKL1Q969V6 931 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 NAPBQ9H115 298 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 CEP290O15078 2479 aa11.8□□□□□ -0.52
SKA2-208ENST00000583927 FGRP09769 529 aa11.79□□□□□ -0.52
SKA2-208ENST00000583927 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
SKA2-208ENST00000583927 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
SKA2-208ENST00000583927 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
SKA2-208ENST00000583927 TRMT44Q8IYL2 757 aaKnown RBP11.79□□□□□ -0.52
SKA2-208ENST00000583927 ZNF444Q8N0Y2 327 aaPredicted RBP11.79□□□□□ -0.52
SKA2-208ENST00000583927 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
SKA2-208ENST00000583927 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
SKA2-208ENST00000583927 ADAMTS5Q9UNA0 930 aa11.79□□□□□ -0.52
SKA2-208ENST00000583927 A0A0D9SFI3 127 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 HIP1O00291 1037 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 GJB1P08034 283 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 DSG3P32926 999 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 PPARAQ07869 468 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 MORN1Q5T089 497 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 PORCNQ9H237 461 aa11.78□□□□□ -0.52
SKA2-208ENST00000583927 HMGCRP04035 888 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 HOXC6P09630 235 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 HSPD1P10809 573 aaKnown RBP11.77□□□□□ -0.53
SKA2-208ENST00000583927 CCL5P13501 91 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 EN2P19622 333 aaPredicted RBP11.77□□□□□ -0.53
SKA2-208ENST00000583927 SDSP20132 328 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 GJA8P48165 433 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 NT5C2P49902 561 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 MTFR1Q15390 333 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 GPR142Q7Z601 462 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 PLEKHH3Q7Z736 793 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 SHCBP1Q8NEM2 672 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 FAM227BQ96M60 508 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 PAGR1Q9BTK6 254 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 TANGO6Q9C0B7 1094 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 PAK6Q9NQU5 681 aaPredicted RBP11.77□□□□□ -0.53
SKA2-208ENST00000583927 RNF216Q9NWF9 866 aaPredicted RBP11.77□□□□□ -0.53
SKA2-208ENST00000583927 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 BTBD7Q9P203 1132 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
SKA2-208ENST00000583927 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.53
SKA2-208ENST00000583927 SLC15A5A6NIM6 579 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 STRNO43815 780 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 ORC4O43929 436 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 FLOT1O75955 427 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
SKA2-208ENST00000583927 TTLL1O95922 423 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 FGAP02671 866 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 INHAP05111 366 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
SKA2-208ENST00000583927 ELNP15502 786 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 NOVP48745 357 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 NMIQ13287 307 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms