RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ANKRD13CQ8N6S4 541 aa15.44■□□□□ 0.06
NDEL1-204ENST00000578172 NLRP3Q96P20 1036 aa15.44■□□□□ 0.06
NDEL1-204ENST00000578172 TBC1D7Q9P0N9 293 aa15.44■□□□□ 0.06
NDEL1-204ENST00000578172 VPS18Q9P253 973 aa15.44■□□□□ 0.06
NDEL1-204ENST00000578172 LRRC37A3O60309 1634 aa15.44■□□□□ 0.06
NDEL1-204ENST00000578172 LIFRP42702 1097 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 ASIC1P78348 528 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 HSP90B2PQ58FF3 399 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 TAF3Q5VWG9 929 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 PTF1AQ7RTS3 328 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 CALCOCO1Q9P1Z2 691 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 TCRBV5S4A2TA0A5A2 114 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 PNMA6AP0CW24 399 aaPredicted RBP15.43■□□□□ 0.06
NDEL1-204ENST00000578172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.43■□□□□ 0.06
NDEL1-204ENST00000578172 POLD4Q9HCU8 107 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
NDEL1-204ENST00000578172 SRGAP2O75044 1071 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 GNAT2P19087 354 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 HIBADHP31937 336 aaKnown RBP15.43■□□□□ 0.06
NDEL1-204ENST00000578172 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
NDEL1-204ENST00000578172 MECOMQ03112 1051 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 DNAJC21Q5F1R6 531 aaKnown RBP15.43■□□□□ 0.06
NDEL1-204ENST00000578172 NCAPH2Q6IBW4 605 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 IQUBQ8NA54 791 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 NGLY1Q96IV0 654 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 CDK5RAP3Q96JB5 506 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 DEF6Q9H4E7 631 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 JADE2Q9NQC1 790 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
NDEL1-204ENST00000578172 NAPAP54920 295 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 SRRTQ9BXP5 876 aaKnown RBP15.42■□□□□ 0.06
NDEL1-204ENST00000578172 ZNF446Q9NWS9 450 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 JCADQ9P266 1359 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 OVOS2A0A0G2JMS6 1433 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 C6orf229H3BNL8 230 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 CHMP4BP1P59074 171 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 IKQ13123 557 aaPredicted RBP15.42■□□□□ 0.06
NDEL1-204ENST00000578172 RAD9BQ6WBX8 426 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 CLEC10AQ8IUN9 316 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 SRBD1Q8N5C6 995 aaKnown RBP15.42■□□□□ 0.06
NDEL1-204ENST00000578172 TC2NQ8N9U0 490 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 RGS22Q8NE09 1264 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 TXKP42681 527 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 FXR1P51114 621 aaKnown RBP eCLIP15.42■□□□□ 0.06
NDEL1-204ENST00000578172 PARD6BQ9BYG5 372 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 TUBE1Q9UJT0 475 aa15.42■□□□□ 0.06
NDEL1-204ENST00000578172 ARID4AP29374 1257 aaPredicted RBP15.41■□□□□ 0.06
NDEL1-204ENST00000578172 PLCD1P51178 756 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 CYP27A1Q02318 531 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
NDEL1-204ENST00000578172 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 HSD3B7Q9H2F3 369 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 HDAC6Q9UBN7 1215 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 SRPRBQ9Y5M8 271 aaKnown RBP15.41■□□□□ 0.06
NDEL1-204ENST00000578172 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
NDEL1-204ENST00000578172 HPSEQ9Y251 543 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 KANK3Q6NY19 840 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 SGMS1Q86VZ5 419 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 REXO1L1PQ8IX06 675 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 C10orf67Q8IYJ2 551 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 GJA10Q969M2 543 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 FOXP1Q9H334 677 aaPredicted RBP15.41■□□□□ 0.06
NDEL1-204ENST00000578172 GPCPD1Q9NPB8 672 aa15.41■□□□□ 0.06
NDEL1-204ENST00000578172 BIN2Q9UBW5 565 aaPredicted RBP15.41■□□□□ 0.06
NDEL1-204ENST00000578172 CCNT1O60563 726 aaKnown RBP15.4■□□□□ 0.06
NDEL1-204ENST00000578172 RPS8P62241 208 aaKnown RBP15.4■□□□□ 0.06
NDEL1-204ENST00000578172 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 CHP1Q99653 195 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 MMRN2Q9H8L6 949 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 KANSL2Q9H9L4 492 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 CAMTA1Q9Y6Y1 1673 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 GSPT2Q8IYD1 628 aaKnown RBP15.4■□□□□ 0.06
NDEL1-204ENST00000578172 PNMA1Q8ND90 353 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
NDEL1-204ENST00000578172 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
NDEL1-204ENST00000578172 CTAGE9A4FU28 777 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 TECP42680 631 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 ST5P78524 1137 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 PAK1Q13153 545 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 MORC3Q14149 939 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 MINPP1Q9UNW1 487 aa15.4■□□□□ 0.06
NDEL1-204ENST00000578172 TERF2Q15554 542 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 CTR9Q6PD62 1173 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 USP17L2Q6R6M4 530 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 RTL9Q8NET4 1388 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 MYO1BO43795 1136 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 SCG2P13521 617 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
NDEL1-204ENST00000578172 KRT31Q15323 416 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 FAM207AQ9NSI2 230 aaPredicted RBP15.39■□□□□ 0.05
NDEL1-204ENST00000578172 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 KCNJ18B7U540 433 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms