RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 RAET1EQ8TD07 263 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 ARMC5Q96C12 935 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 LNPKQ9C0E8 428 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 EMILIN3Q9NT22 766 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 ARPP21Q9UBL0 812 aaPredicted RBP10.87□□□□□ -0.67
NDE1-207ENST00000573203 STAP2Q9UGK3 403 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 CENPFP49454 3210 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 GSG1L2A8MUP6 293 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 M0R2C6 588 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 IGHDP01880 384 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 APPP05067 770 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 HOXA7P31268 230 aaPredicted RBP10.86□□□□□ -0.67
NDE1-207ENST00000573203 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 CDK8P49336 464 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 FAM110CQ1W6H9 321 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 SMC5Q8IY18 1101 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
NDE1-207ENST00000573203 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 PATL2C9JE40 543 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 SNPHO15079 494 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 AKR1B1P15121 316 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 TDO2P48775 406 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 HERVK_113P62684 666 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 PRKCZQ05513 592 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 SBK1Q52WX2 424 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 SH3TC2Q8TF17 1288 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 COA7Q96BR5 231 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 ZNF333Q96JL9 665 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 SEC62Q99442 399 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 DOCK3Q8IZD9 2030 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 RBBP6Q7Z6E9 1792 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 TNRC18O15417 2968 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 VCAM1P19320 739 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 GRK4P32298 578 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 NUCB1Q02818 461 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 ICA1Q05084 483 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L24Q0WX57 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 ZMYM1Q5SVZ6 1142 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 STK11IPQ8N1F8 1099 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 NACAP1Q9BZK3 213 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 MKNK2Q9HBH9 465 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 ARHGEF10LQ9HCE6 1279 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 EPB41L4AQ9HCS5 686 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 TRIM6-TRIM34B2RNG4 842 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 FLT3LGP49771 235 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 CATSPERGQ6ZRH7 1159 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 IFNL3Q8IZI9 196 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 RILPL2Q969X0 211 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 PAGR1Q9BTK6 254 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 NAPBQ9H115 298 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 RPAP3Q9H6T3 665 aaPredicted RBP10.83□□□□□ -0.68
NDE1-207ENST00000573203 SH2D4AQ9H788 454 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
NDE1-207ENST00000573203 MORF4L1Q9UBU8 362 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 KIAA0100Q14667 2235 aaKnown RBP10.82□□□□□ -0.68
NDE1-207ENST00000573203 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 PEX10O60683 326 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 ERVK-24P63145 666 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 UBXN2AP68543 259 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 CLEC10AQ8IUN9 316 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 CCAR1Q8IX12 1150 aaKnown RBP10.82□□□□□ -0.68
NDE1-207ENST00000573203 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 ZNF287Q9HBT7 754 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 TXNRD2Q9NNW7 524 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 TMX2Q9Y320 296 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 RBM19Q9Y4C8 960 aaKnown RBP10.82□□□□□ -0.68
NDE1-207ENST00000573203 ADCY3O60266 1144 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 SLC3A2P08195 630 aaKnown RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 RASA1P20936 1047 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms