RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 GOLIM4O00461 696 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 EN2P19622 333 aaPredicted RBP12.54□□□□□ -0.4
LINC00564-201ENST00000567258 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 ANKRD13CQ8N6S4 541 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 NKX2-3Q8TAU0 364 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 WDR18Q9BV38 432 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 SERPINB13Q9UIV8 391 aa12.54□□□□□ -0.4
LINC00564-201ENST00000567258 GDF11O95390 407 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 BACE1P56817 501 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 MTMR2Q13614 643 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 FAM110CQ1W6H9 321 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 CCAR1Q8IX12 1150 aaKnown RBP12.53□□□□□ -0.4
LINC00564-201ENST00000567258 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 FEZ1Q99689 392 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
LINC00564-201ENST00000567258 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
LINC00564-201ENST00000567258 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
LINC00564-201ENST00000567258 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.4
LINC00564-201ENST00000567258 PDE6AP16499 860 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 PRKCZQ05513 592 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.41
LINC00564-201ENST00000567258 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 ZSCAN25Q6NSZ9 544 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.41
LINC00564-201ENST00000567258 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 GPATCH3Q96I76 525 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 EHD4Q9H223 541 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 BOLA2Q9H3K6 86 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
LINC00564-201ENST00000567258 DPYSL4O14531 572 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 ADCY3O60266 1144 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 ATP5JP18859 108 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 CTGFP29279 349 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 USP14P54578 494 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 RRP1BQ14684 758 aaKnown RBP12.51□□□□□ -0.41
LINC00564-201ENST00000567258 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 GCC1Q96CN9 775 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 RNF208Q9H0X6 261 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
LINC00564-201ENST00000567258 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
LINC00564-201ENST00000567258 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
LINC00564-201ENST00000567258 GH2P01242 217 aa12.5□□□□□ -0.41
LINC00564-201ENST00000567258 FLT3LGP49771 235 aa12.5□□□□□ -0.41
LINC00564-201ENST00000567258 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
LINC00564-201ENST00000567258 GTF3C2Q8WUA4 911 aaPredicted RBP12.5□□□□□ -0.41
LINC00564-201ENST00000567258 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
LINC00564-201ENST00000567258 DNAJC18Q9H819 358 aa12.5□□□□□ -0.41
LINC00564-201ENST00000567258 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
LINC00564-201ENST00000567258 MPHOSPH10O00566 681 aaKnown RBP12.49□□□□□ -0.41
LINC00564-201ENST00000567258 CCL5P13501 91 aa12.49□□□□□ -0.41
LINC00564-201ENST00000567258 HOXA7P31268 230 aaPredicted RBP12.49□□□□□ -0.41
LINC00564-201ENST00000567258 CAMK2BQ13554 666 aa12.49□□□□□ -0.41
LINC00564-201ENST00000567258 ZYXQ15942 572 aaKnown RBP12.49□□□□□ -0.41
LINC00564-201ENST00000567258 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
LINC00564-201ENST00000567258 PXYLP1Q8TE99 480 aa12.49□□□□□ -0.41
LINC00564-201ENST00000567258 HAUS7Q99871 368 aa12.49□□□□□ -0.41
LINC00564-201ENST00000567258 MKI67P46013 3256 aaKnown RBP12.49□□□□□ -0.41
LINC00564-201ENST00000567258 CAPN2P17655 700 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 HERVK_113P62684 666 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 IRF5Q13568 498 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 MTFR1Q15390 333 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 GPRC5AQ8NFJ5 357 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 DDX12PQ92771 950 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 ATP8A2Q9NTI2 1148 aa12.48□□□□□ -0.41
LINC00564-201ENST00000567258 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 SMARCA5O60264 1052 aaPredicted RBP12.47□□□□□ -0.41
LINC00564-201ENST00000567258 MBD4O95243 580 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 GJB1P08034 283 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 ELNP15502 786 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 ADD2P35612 726 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 GJA8P48165 433 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 PLCD1P51178 756 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 CCNA1P78396 465 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 LAPTM4AQ15012 233 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 LRRFIP1Q32MZ4 808 aaKnown RBP12.47□□□□□ -0.41
LINC00564-201ENST00000567258 LCORLQ8N3X6 602 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 EDC3Q96F86 508 aaKnown RBP12.47□□□□□ -0.41
LINC00564-201ENST00000567258 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
LINC00564-201ENST00000567258 PAGR1Q9BTK6 254 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 ARMT1Q9H993 441 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
LINC00564-201ENST00000567258 BRCA2P51587 3418 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms