RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 KIAA1755Q5JYT7 1200 aa17.97■□□□□ 0.47
EDC3-206ENST00000563009 IQCA1Q86XH1 822 aa17.97■□□□□ 0.47
EDC3-206ENST00000563009 NCOA7Q8NI08 942 aa17.97■□□□□ 0.47
EDC3-206ENST00000563009 TTC14Q96N46 770 aa17.97■□□□□ 0.47
EDC3-206ENST00000563009 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
EDC3-206ENST00000563009 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
EDC3-206ENST00000563009 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.47
EDC3-206ENST00000563009 PABPC4Q13310 644 aaKnown RBP eCLIP17.96■□□□□ 0.47
EDC3-206ENST00000563009 CRHR2Q13324 411 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 RCSD1Q6JBY9 416 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 RALYLQ86SE5 291 aaKnown RBP17.96■□□□□ 0.47
EDC3-206ENST00000563009 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 GMCL1P1Q8NEA9 526 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
EDC3-206ENST00000563009 FOXN1O15353 648 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 ZKSCAN1P17029 563 aaPredicted RBP17.95■□□□□ 0.46
EDC3-206ENST00000563009 TAF1CQ15572 869 aaPredicted RBP17.95■□□□□ 0.46
EDC3-206ENST00000563009 CYB5R4Q7L1T6 521 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 DGKHQ86XP1 1220 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 MB21D2Q8IYB1 491 aaPredicted RBP17.95■□□□□ 0.46
EDC3-206ENST00000563009 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
EDC3-206ENST00000563009 ANKS1AQ92625 1134 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 ZSCAN10Q96SZ4 725 aaPredicted RBP17.95■□□□□ 0.46
EDC3-206ENST00000563009 PARK7Q99497 189 aaKnown RBP17.95■□□□□ 0.46
EDC3-206ENST00000563009 ZFYVE28Q9HCC9 887 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 PNMA3Q9UL41 463 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 ADGRA2Q96PE1 1338 aa17.95■□□□□ 0.46
EDC3-206ENST00000563009 USP17L15C9J2P7 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L13C9JLJ4 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L11C9JVI0 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L18D6R9N7 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L22D6RA61 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L17D6RBQ6 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L19D6RCP7 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L20D6RJB6 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 F5H6K3 240 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 WDR46O15213 610 aaKnown RBP17.94■□□□□ 0.46
EDC3-206ENST00000563009 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 TOP1P11387 765 aaKnown RBP17.94■□□□□ 0.46
EDC3-206ENST00000563009 KLRC3Q07444 240 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 USP17L24Q0WX57 530 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 NOM1Q5C9Z4 860 aaKnown RBP17.94■□□□□ 0.46
EDC3-206ENST00000563009 SPICE1Q8N0Z3 855 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 ENAHQ8N8S7 591 aaPredicted RBP17.94■□□□□ 0.46
EDC3-206ENST00000563009 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 ASCC2Q9H1I8 757 aaPredicted RBP17.94■□□□□ 0.46
EDC3-206ENST00000563009 R3HDMLQ9H3Y0 253 aa17.94■□□□□ 0.46
EDC3-206ENST00000563009 RPAP3Q9H6T3 665 aaPredicted RBP17.94■□□□□ 0.46
EDC3-206ENST00000563009 TLR2O60603 784 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 NDUFB10O96000 172 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 CYP2C8P10632 490 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 OSBPP22059 807 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 KRT32Q14532 448 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 CATSPERGQ6ZRH7 1159 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 TNKSO95271 1327 aa17.93■□□□□ 0.46
EDC3-206ENST00000563009 SEC24BO95487 1268 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 HSPA8P11142 646 aaKnown RBP17.92■□□□□ 0.46
EDC3-206ENST00000563009 CTCFP49711 727 aaPredicted RBP17.92■□□□□ 0.46
EDC3-206ENST00000563009 ANTXR2P58335 489 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 COL9A3Q14050 684 aaPredicted RBP17.92■□□□□ 0.46
EDC3-206ENST00000563009 SEC23AQ15436 765 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 GMCL1Q96IK5 515 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 MTA3Q9BTC8 594 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 TSKSQ9UJT2 592 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 SNX14Q9Y5W7 946 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 RLFQ13129 1914 aa17.92■□□□□ 0.46
EDC3-206ENST00000563009 PARP14Q460N5 1801 aa17.91■□□□□ 0.46
EDC3-206ENST00000563009 MCM5P33992 734 aa17.91■□□□□ 0.46
EDC3-206ENST00000563009 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
EDC3-206ENST00000563009 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
EDC3-206ENST00000563009 SLFN13Q68D06 897 aa17.91■□□□□ 0.46
EDC3-206ENST00000563009 C17orf99Q6UX52 265 aa17.91■□□□□ 0.46
EDC3-206ENST00000563009 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
EDC3-206ENST00000563009 GPR25O00155 361 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 MCCP23508 829 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 HERVK_113P62684 666 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 SART3Q15020 963 aaKnown RBP17.9■□□□□ 0.46
EDC3-206ENST00000563009 FAM83BQ5T0W9 1011 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 LBX2Q6XYB7 198 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 IGDCC4Q8TDY8 1250 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 SMCR8Q8TEV9 937 aaPredicted RBP17.9■□□□□ 0.46
EDC3-206ENST00000563009 P2RX7Q99572 595 aaKnown RBP17.9■□□□□ 0.46
EDC3-206ENST00000563009 TANGO6Q9C0B7 1094 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 WDR19Q8NEZ3 1342 aa17.9■□□□□ 0.46
EDC3-206ENST00000563009 IFIT3O14879 490 aaKnown RBP17.89■□□□□ 0.45
EDC3-206ENST00000563009 PRC1O43663 620 aa17.89■□□□□ 0.45
EDC3-206ENST00000563009 RAD21O60216 631 aa17.89■□□□□ 0.45
EDC3-206ENST00000563009 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
EDC3-206ENST00000563009 BCRP11274 1271 aa17.89■□□□□ 0.45
EDC3-206ENST00000563009 GCLCP48506 637 aaPredicted RBP17.89■□□□□ 0.45
EDC3-206ENST00000563009 COG2Q14746 738 aa17.89■□□□□ 0.45
EDC3-206ENST00000563009 IFIT1BQ5T764 474 aaKnown RBP17.89■□□□□ 0.45
EDC3-206ENST00000563009 GTF3C2Q8WUA4 911 aaPredicted RBP17.89■□□□□ 0.45
EDC3-206ENST00000563009 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms