RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 EPB41L4AQ9HCS5 686 aaPredicted RBP21.27■■□□□ 1
CMTM3-204ENST00000562357 GOPCQ9HD26 462 aa21.27■■□□□ 1
CMTM3-204ENST00000562357 HOXC10Q9NYD6 342 aa21.27■■□□□ 1
CMTM3-204ENST00000562357 MYH8P13535 1937 aa21.27■■□□□ 1
CMTM3-204ENST00000562357 SMIM22K7EJ46 135 aa21.26■□□□□ 0.99
CMTM3-204ENST00000562357 COG2Q14746 738 aa21.26■□□□□ 0.99
CMTM3-204ENST00000562357 WDR78Q5VTH9 848 aa21.26■□□□□ 0.99
CMTM3-204ENST00000562357 LBX2Q6XYB7 198 aa21.26■□□□□ 0.99
CMTM3-204ENST00000562357 CLEC10AQ8IUN9 316 aa21.26■□□□□ 0.99
CMTM3-204ENST00000562357 ZNF444Q8N0Y2 327 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-204ENST00000562357 TRIM6-TRIM34B2RNG4 842 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 RAD21O60216 631 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 HMGCRP04035 888 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 GJB1P08034 283 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 EEF2P13639 858 aaKnown RBP21.25■□□□□ 0.99
CMTM3-204ENST00000562357 PDE4BQ07343 736 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 PLEKHH3Q7Z736 793 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 TICAM2Q86XR7 235 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 SPICE1Q8N0Z3 855 aa21.25■□□□□ 0.99
CMTM3-204ENST00000562357 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-204ENST00000562357 WDR46O15213 610 aaKnown RBP21.24■□□□□ 0.99
CMTM3-204ENST00000562357 PEX10O60683 326 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 FLOT1O75955 427 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 RASA1P20936 1047 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 GPR142Q7Z601 462 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 TRMT44Q8IYL2 757 aaKnown RBP21.24■□□□□ 0.99
CMTM3-204ENST00000562357 MB21D1Q8N884 522 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 PORCNQ9H237 461 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 GJD2Q9UKL4 321 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 IVNS1ABPQ9Y6Y0 642 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 PDE4DIPQ5VU43 2346 aa21.24■□□□□ 0.99
CMTM3-204ENST00000562357 IGHDP01880 384 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 CYP2B6P20813 491 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 RGS2P41220 211 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 GJA8P48165 433 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 NUCB1Q02818 461 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 Q3C1V9 767 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 HELLSQ9NRZ9 838 aa21.23■□□□□ 0.99
CMTM3-204ENST00000562357 PRPF38BQ5VTL8 546 aaKnown RBP21.22■□□□□ 0.99
CMTM3-204ENST00000562357 SIAH1Q8IUQ4 282 aa21.22■□□□□ 0.99
CMTM3-204ENST00000562357 RILPL2Q969X0 211 aa21.22■□□□□ 0.99
CMTM3-204ENST00000562357 CENPFP49454 3210 aa21.21■□□□□ 0.99
CMTM3-204ENST00000562357 CNMDO75829 334 aa21.21■□□□□ 0.99
CMTM3-204ENST00000562357 XRCC5P13010 732 aaKnown RBP21.21■□□□□ 0.99
CMTM3-204ENST00000562357 ZKSCAN1P17029 563 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-204ENST00000562357 CAPN2P17655 700 aa21.21■□□□□ 0.99
CMTM3-204ENST00000562357 PPARAQ07869 468 aa21.21■□□□□ 0.99
CMTM3-204ENST00000562357 SAMD1Q6SPF0 538 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-204ENST00000562357 CCDC129Q6ZRS4 1044 aa21.21■□□□□ 0.99
CMTM3-204ENST00000562357 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
CMTM3-204ENST00000562357 PRDM1O75626 825 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 TSPY3P0CV98 308 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 TSPY8P0CW00 308 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 MCMDC2Q4G0Z9 681 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 APBA2Q99767 749 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 BTBD7Q9P203 1132 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 NYAP2Q9P242 653 aa21.2■□□□□ 0.98
CMTM3-204ENST00000562357 DSG3P32926 999 aa21.19■□□□□ 0.98
CMTM3-204ENST00000562357 MFAP1P55081 439 aaKnown RBP21.19■□□□□ 0.98
CMTM3-204ENST00000562357 PLS1Q14651 629 aa21.19■□□□□ 0.98
CMTM3-204ENST00000562357 KIAA1755Q5JYT7 1200 aa21.19■□□□□ 0.98
CMTM3-204ENST00000562357 PPP4R3BQ5MIZ7 849 aa21.19■□□□□ 0.98
CMTM3-204ENST00000562357 POTEEQ6S8J3 1075 aa21.19■□□□□ 0.98
CMTM3-204ENST00000562357 DEFB118Q96PH6 123 aa21.19■□□□□ 0.98
CMTM3-204ENST00000562357 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.19■□□□□ 0.98
CMTM3-204ENST00000562357 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.19■□□□□ 0.986e-8■■■■■ 50.5
CMTM3-204ENST00000562357 HMX1Q9NP08 348 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-204ENST00000562357 SLC15A5A6NIM6 579 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 SGPL1O95470 568 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 TFRCP02786 760 aaKnown RBP21.18■□□□□ 0.98
CMTM3-204ENST00000562357 MAP2K5Q13163 448 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 MORN1Q5T089 497 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 PLEKHM2Q8IWE5 1019 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 TRIB2Q92519 343 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 SPATC1LQ9H0A9 340 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 OSBPL3Q9H4L5 887 aa21.18■□□□□ 0.98
CMTM3-204ENST00000562357 TTLL1O95922 423 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 PTPREP23469 700 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 ATG4CQ96DT6 458 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 FAM227BQ96M60 508 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 PAK6Q9NQU5 681 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-204ENST00000562357 CLIP2Q9UDT6 1046 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 SYNPO2Q9UMS6 1093 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 RPTORQ8N122 1335 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 DOCK3Q8IZD9 2030 aa21.17■□□□□ 0.98
CMTM3-204ENST00000562357 A0A0D9SFI3 127 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-204ENST00000562357 TFAP4Q01664 338 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 NMIQ13287 307 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-204ENST00000562357 FAM83BQ5T0W9 1011 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 NEDD1Q8NHV4 660 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 USP6NLQ92738 828 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 CEP95Q96GE4 821 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 MOV10L1Q9BXT6 1211 aaKnown RBP21.16■□□□□ 0.98
CMTM3-204ENST00000562357 MROH8Q9H579 483 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 DIAPH3Q9NSV4 1193 aa21.16■□□□□ 0.98
CMTM3-204ENST00000562357 PLIN4Q96Q06 1357 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms