RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 LINC00310P59036 64 aa6.36□□□□□ -1.39
LRRC28-218ENST00000560236 TMEM201Q5SNT2 666 aa6.36□□□□□ -1.39
LRRC28-218ENST00000560236 TTLL10Q6ZVT0 673 aa6.36□□□□□ -1.39
LRRC28-218ENST00000560236 SLC6A17Q9H1V8 727 aa6.36□□□□□ -1.39
LRRC28-218ENST00000560236 CILPO75339 1184 aa6.35□□□□□ -1.39
LRRC28-218ENST00000560236 CAMK2GQ13555 558 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-218ENST00000560236 TIGD5Q53EQ6 642 aa6.35□□□□□ -1.39
LRRC28-218ENST00000560236 IRF2BP1Q8IU81 584 aa6.35□□□□□ -1.39
LRRC28-218ENST00000560236 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
LRRC28-218ENST00000560236 CWC22Q9HCG8 908 aaKnown RBP6.35□□□□□ -1.39
LRRC28-218ENST00000560236 FAM221AA4D161 298 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 F6X3S4 739 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 DAB2P98082 770 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 NR0B2Q15466 257 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 ZNF605Q86T29 641 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 SPPL2CQ8IUH8 684 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 KREMEN1Q96MU8 473 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 TRAIPQ9BWF2 469 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 RAPGEFL1Q9UHV5 662 aa6.34□□□□□ -1.39
LRRC28-218ENST00000560236 SHROOM4Q9ULL8 1493 aa6.34□□□□□ -1.4
LRRC28-218ENST00000560236 F13A1P00488 732 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 XPCQ01831 940 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-218ENST00000560236 LMNB2Q03252 620 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 DUSP4Q13115 394 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-218ENST00000560236 GATAD2BQ8WXI9 593 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 INTS4Q96HW7 963 aaKnown RBP6.33□□□□□ -1.4
LRRC28-218ENST00000560236 ASPNQ9BXN1 380 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 MCOLN1Q9GZU1 580 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 REV1Q9UBZ9 1251 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 KLHL3Q9UH77 587 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 GPR160Q9UJ42 338 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 TIMELESSQ9UNS1 1208 aa6.33□□□□□ -1.4
LRRC28-218ENST00000560236 YBX2Q9Y2T7 364 aaKnown RBP6.33□□□□□ -1.4
LRRC28-218ENST00000560236 USP31Q70CQ4 1352 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 PEX10O60683 326 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 PF4P02776 101 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 INHBBP09529 407 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 CTSHP09668 335 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 DLG4P78352 724 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 CHRNEQ04844 493 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 CLEC16AQ2KHT3 1053 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 CCDC74BQ96LY2 380 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 FAM161BQ96MY7 647 aa6.32□□□□□ -1.4
LRRC28-218ENST00000560236 PRR36Q9H6K5 1346 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 MYOCOSA0A1B0GUC4 107 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 RBM47A0AV96 593 aaKnown RBP6.31□□□□□ -1.4
LRRC28-218ENST00000560236 SHISA3A0PJX4 238 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 CHURC1-FNTBB4DL54 471 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 PRRG2O14669 202 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 GRIN3BO60391 1043 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 SEMA7AO75326 666 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 HTR3BO95264 441 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 PDE6BP35913 854 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 CHMP4BP1P59074 171 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 TEKQ02763 1124 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 SNX17Q15036 470 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 TMEM132EQ6IEE7 984 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 SND1Q7KZF4 910 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRRC28-218ENST00000560236 TMC4Q7Z404 712 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 RELL1Q8IUW5 271 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 PHACTR4Q8IZ21 702 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 ANKS4BQ8N8V4 417 aa6.31□□□□□ -1.4
LRRC28-218ENST00000560236 NCANO14594 1321 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 CUX2O14529 1486 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 B8ZZF3 427 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 GBP2P32456 591 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-218ENST00000560236 CRELD1Q96HD1 420 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 RHOVQ96L33 236 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 TMEM74Q96NL1 305 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 ASCC2Q9H1I8 757 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-218ENST00000560236 ZNF552Q9H707 407 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-218ENST00000560236 EBF1Q9UH73 591 aa6.3□□□□□ -1.4
LRRC28-218ENST00000560236 POLR3KQ9Y2Y1 108 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-218ENST00000560236 GBP1P32455 592 aa6.29□□□□□ -1.4
LRRC28-218ENST00000560236 CTSWP56202 376 aa6.29□□□□□ -1.4
LRRC28-218ENST00000560236 SNAP47Q5SQN1 464 aa6.29□□□□□ -1.4
LRRC28-218ENST00000560236 LINC01599Q8WXQ3 324 aa6.29□□□□□ -1.4
LRRC28-218ENST00000560236 KIF2CQ99661 725 aa6.29□□□□□ -1.4
LRRC28-218ENST00000560236 CNOT6Q9ULM6 557 aaKnown RBP6.29□□□□□ -1.4
LRRC28-218ENST00000560236 TEX51A0A1B0GUA7 166 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 PSPNO60542 156 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 RPL10P27635 214 aaKnown RBP6.28□□□□□ -1.4
LRRC28-218ENST00000560236 GALK1P51570 392 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 FAM160A1Q05DH4 1040 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 NMIQ13287 307 aaPredicted RBP6.28□□□□□ -1.4
LRRC28-218ENST00000560236 PWP1Q13610 501 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 RNF111Q6ZNA4 994 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 ENOX1Q8TC92 643 aaKnown RBP6.28□□□□□ -1.4
LRRC28-218ENST00000560236 SHISA4Q96DD7 197 aa6.28□□□□□ -1.4
LRRC28-218ENST00000560236 MINDY4BA8MYZ0 360 aa6.27□□□□□ -1.41
LRRC28-218ENST00000560236 SORBS3O60504 671 aa6.27□□□□□ -1.41
LRRC28-218ENST00000560236 DNAJA2O60884 412 aa6.27□□□□□ -1.41
LRRC28-218ENST00000560236 MLECQ14165 292 aa6.27□□□□□ -1.41
LRRC28-218ENST00000560236 MPP2Q14168 576 aa6.27□□□□□ -1.41
LRRC28-218ENST00000560236 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
LRRC28-218ENST00000560236 G6PC3Q9BUM1 346 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms