RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SREBF2Q12772 1141 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 WTAPQ15007 396 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 IFIT1BQ5T764 474 aaKnown RBP24.98■■□□□ 1.59
CASC4-204ENST00000557945 RCSD1Q6JBY9 416 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 FASTKD5Q7L8L6 764 aaKnown RBP24.98■■□□□ 1.59
CASC4-204ENST00000557945 BRI3BPQ8WY22 251 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 TMEM47Q9BQJ4 181 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 GOPCQ9HD26 462 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 EMILIN3Q9NT22 766 aa24.98■■□□□ 1.59
CASC4-204ENST00000557945 MAP2K2P36507 400 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 SH3D19Q5HYK7 790 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 TMEM87BQ96K49 555 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 TM6SF1Q9BZW5 370 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 VCPKMTQ9H867 229 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 KAT14Q9H8E8 782 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 MTMR7Q9Y216 660 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 CYP46A1Q9Y6A2 500 aa24.97■■□□□ 1.59
CASC4-204ENST00000557945 RPS6KB1P23443 525 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 INHBEP58166 350 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 FGD1P98174 961 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 EXOSC10Q01780 885 aaKnown RBP24.96■■□□□ 1.59
CASC4-204ENST00000557945 SEC23AQ15436 765 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 SPICE1Q8N0Z3 855 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 IGDCC4Q8TDY8 1250 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 CHMP4CQ96CF2 233 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 UPF3BQ9BZI7 483 aaKnown RBP24.96■■□□□ 1.59
CASC4-204ENST00000557945 ZSWIM6Q9HCJ5 1215 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 GPHNQ9NQX3 736 aaPredicted RBP24.96■■□□□ 1.59
CASC4-204ENST00000557945 SYNPO2Q9UMS6 1093 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 WDR19Q8NEZ3 1342 aa24.96■■□□□ 1.59
CASC4-204ENST00000557945 F5H6K3 240 aa24.95■■□□□ 1.59
CASC4-204ENST00000557945 RBM25P49756 843 aaKnown RBP24.95■■□□□ 1.59
CASC4-204ENST00000557945 KLRC3Q07444 240 aa24.95■■□□□ 1.59
CASC4-204ENST00000557945 RUFY3Q7L099 469 aa24.95■■□□□ 1.59
CASC4-204ENST00000557945 PROCA1Q8NCQ7 364 aaPredicted RBP24.95■■□□□ 1.59
CASC4-204ENST00000557945 ANKS1AQ92625 1134 aa24.95■■□□□ 1.59
CASC4-204ENST00000557945 MTA3Q9BTC8 594 aa24.95■■□□□ 1.59
CASC4-204ENST00000557945 TESPA1A2RU30 521 aaPredicted RBP24.94■■□□□ 1.58
CASC4-204ENST00000557945 SH2B2O14492 632 aaPredicted RBP24.94■■□□□ 1.58
CASC4-204ENST00000557945 NDUFB10O96000 172 aa24.94■■□□□ 1.58
CASC4-204ENST00000557945 MOGSQ13724 837 aa24.94■■□□□ 1.58
CASC4-204ENST00000557945 KIAA1755Q5JYT7 1200 aa24.94■■□□□ 1.58
CASC4-204ENST00000557945 C12orf42Q96LP6 360 aa24.94■■□□□ 1.58
CASC4-204ENST00000557945 MYH4Q9Y623 1939 aa24.94■■□□□ 1.58
CASC4-204ENST00000557945 BTBD19C9JJ37 291 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 TREML2Q5T2D2 321 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 SLFN13Q68D06 897 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 NFXL1Q6ZNB6 911 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 REM2Q8IYK8 340 aaPredicted RBP24.93■■□□□ 1.58
CASC4-204ENST00000557945 DNAJC5GQ8N7S2 189 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 PNMA1Q8ND90 353 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 GMCL1P1Q8NEA9 526 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 LPAR1Q92633 364 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 IL17RAQ96F46 866 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 TBC1D32Q96NH3 1257 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 PTPN18Q99952 460 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 LY9Q9HBG7 655 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 SENP2Q9HC62 589 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 ISY1Q9ULR0 285 aaKnown RBP24.93■■□□□ 1.58
CASC4-204ENST00000557945 AGTPBP1Q9UPW5 1226 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 PTPRFP10586 1907 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 VCAM1P19320 739 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 TM4SF4P48230 202 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 OTUD7BQ6GQQ9 843 aa24.93■■□□□ 1.58
CASC4-204ENST00000557945 IGF2BP3O00425 579 aaKnown RBP eCLIP24.92■■□□□ 1.58
CASC4-204ENST00000557945 GPAT2Q6NUI2 795 aa24.92■■□□□ 1.58
CASC4-204ENST00000557945 Q6ZUG5 572 aa24.92■■□□□ 1.58
CASC4-204ENST00000557945 IFNL1Q8IU54 200 aa24.92■■□□□ 1.58
CASC4-204ENST00000557945 FAM43AQ8N2R8 423 aa24.92■■□□□ 1.58
CASC4-204ENST00000557945 TMTC2Q8N394 836 aa24.92■■□□□ 1.58
CASC4-204ENST00000557945 RPAP3Q9H6T3 665 aaPredicted RBP24.92■■□□□ 1.58
CASC4-204ENST00000557945 PDRG1Q9NUG6 133 aa24.92■■□□□ 1.58
CASC4-204ENST00000557945 CCDC69A6NI79 296 aa24.91■■□□□ 1.58
CASC4-204ENST00000557945 ANKRD23Q86SG2 305 aa24.91■■□□□ 1.58
CASC4-204ENST00000557945 NUP88Q99567 741 aaPredicted RBP24.91■■□□□ 1.58
CASC4-204ENST00000557945 PDHXO00330 501 aa24.9■■□□□ 1.58
CASC4-204ENST00000557945 WDR46O15213 610 aaKnown RBP24.9■■□□□ 1.58
CASC4-204ENST00000557945 LIFRP42702 1097 aa24.9■■□□□ 1.58
CASC4-204ENST00000557945 SLC1A4P43007 532 aa24.9■■□□□ 1.58
CASC4-204ENST00000557945 PABPC4Q13310 644 aaKnown RBP eCLIP24.9■■□□□ 1.58
CASC4-204ENST00000557945 FAM83BQ5T0W9 1011 aa24.9■■□□□ 1.58
CASC4-204ENST00000557945 CATIPQ7Z7H3 387 aa24.9■■□□□ 1.58
CASC4-204ENST00000557945 TANGO6Q9C0B7 1094 aa24.9■■□□□ 1.58
CASC4-204ENST00000557945 CCDC96Q2M329 555 aa24.89■■□□□ 1.57
CASC4-204ENST00000557945 RASGRP2Q7LDG7 609 aa24.89■■□□□ 1.57
CASC4-204ENST00000557945 LOC285556D6RIA3 1793 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L15C9J2P7 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L13C9JLJ4 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L11C9JVI0 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L18D6R9N7 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L22D6RA61 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L17D6RBQ6 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L19D6RCP7 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L20D6RJB6 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 BMP3P12645 472 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 NEK4P51957 841 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 USP17L24Q0WX57 530 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 DCAF4Q8WV16 495 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 BRF1Q92994 677 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 GMCL1Q96IK5 515 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms