RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 COL11A1P12107 1806 aaPredicted RBP20.78■□□□□ 0.92
CDK4-210ENST00000551888 B4E1Z4 1266 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 BCRP11274 1271 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 NOVP48745 357 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 POTEEQ6S8J3 1075 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 STOX1Q6ZVD7 989 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 LRRC47Q8N1G4 583 aaKnown RBP20.78■□□□□ 0.92
CDK4-210ENST00000551888 RPAP3Q9H6T3 665 aaPredicted RBP20.78■□□□□ 0.92
CDK4-210ENST00000551888 SH2D4AQ9H788 454 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 PNMA3Q9UL41 463 aa20.78■□□□□ 0.92
CDK4-210ENST00000551888 PEX10O60683 326 aa20.77■□□□□ 0.92
CDK4-210ENST00000551888 FKTNO75072 461 aa20.77■□□□□ 0.92
CDK4-210ENST00000551888 TTLL1O95922 423 aa20.77■□□□□ 0.92
CDK4-210ENST00000551888 PABPC4Q13310 644 aaKnown RBP eCLIP20.77■□□□□ 0.924e-12■■■□□ 17.5
CDK4-210ENST00000551888 CASC1Q6TDU7 716 aa20.77■□□□□ 0.92
CDK4-210ENST00000551888 KIAA1211Q6ZU35 1233 aa20.77■□□□□ 0.92
CDK4-210ENST00000551888 MKL1Q969V6 931 aa20.77■□□□□ 0.92
CDK4-210ENST00000551888 P2RX7Q99572 595 aaKnown RBP20.77■□□□□ 0.92
CDK4-210ENST00000551888 KDM4AO75164 1064 aa20.76■□□□□ 0.91
CDK4-210ENST00000551888 OSBPP22059 807 aa20.76■□□□□ 0.91
CDK4-210ENST00000551888 IRX3P78415 501 aaPredicted RBP20.76■□□□□ 0.91
CDK4-210ENST00000551888 SP3Q02447 781 aa20.76■□□□□ 0.91
CDK4-210ENST00000551888 CATSPERGQ6ZRH7 1159 aa20.76■□□□□ 0.91
CDK4-210ENST00000551888 CD99L2Q8TCZ2 262 aa20.76■□□□□ 0.91
CDK4-210ENST00000551888 SMCR8Q8TEV9 937 aaPredicted RBP20.76■□□□□ 0.91
CDK4-210ENST00000551888 LPAR1Q92633 364 aa20.76■□□□□ 0.91
CDK4-210ENST00000551888 USP17L15C9J2P7 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L13C9JLJ4 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L11C9JVI0 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L18D6R9N7 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L22D6RA61 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L17D6RBQ6 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L19D6RCP7 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L20D6RJB6 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 NDUFB10O96000 172 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 CTGFP29279 349 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 HERVK_113P62684 666 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 USP17L24Q0WX57 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 NECTIN1Q15223 517 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 RCSD1Q6JBY9 416 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 ANKRD13CQ8N6S4 541 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 ESR2Q92731 530 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 NUP88Q99567 741 aaPredicted RBP20.75■□□□□ 0.91
CDK4-210ENST00000551888 ZKSCAN3Q9BRR0 538 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 ARHGAP39Q9C0H5 1083 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 TCP11L1Q9NUJ3 509 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 STX8Q9UNK0 236 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 DOCK3Q8IZD9 2030 aa20.75■□□□□ 0.91
CDK4-210ENST00000551888 F5H6K3 240 aa20.74■□□□□ 0.91
CDK4-210ENST00000551888 WDR46O15213 610 aaKnown RBP20.74■□□□□ 0.91
CDK4-210ENST00000551888 KLRC3Q07444 240 aa20.74■□□□□ 0.91
CDK4-210ENST00000551888 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
CDK4-210ENST00000551888 GOPCQ9HD26 462 aa20.74■□□□□ 0.91
CDK4-210ENST00000551888 TXNRD2Q9NNW7 524 aa20.74■□□□□ 0.91
CDK4-210ENST00000551888 SPDYE16A6NNV3 312 aaPredicted RBP20.73■□□□□ 0.91
CDK4-210ENST00000551888 E7EWF7 191 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 SLC27A2O14975 620 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 RAD21O60216 631 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 ECM2O94769 699 aaPredicted RBP20.73■□□□□ 0.91
CDK4-210ENST00000551888 LACTBP83111 547 aaPredicted RBP20.73■□□□□ 0.91
CDK4-210ENST00000551888 FAM83BQ5T0W9 1011 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 CREB3L3Q68CJ9 461 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 CYB5R4Q7L1T6 521 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 GMCL1P1Q8NEA9 526 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 TANGO6Q9C0B7 1094 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 ZSWIM5Q9P217 1185 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 SYNPO2Q9UMS6 1093 aa20.73■□□□□ 0.91
CDK4-210ENST00000551888 FAM110CQ1W6H9 321 aa20.72■□□□□ 0.91
CDK4-210ENST00000551888 KRT23Q9C075 422 aa20.72■□□□□ 0.91
CDK4-210ENST00000551888 FBXO28Q9NVF7 368 aa20.72■□□□□ 0.91
CDK4-210ENST00000551888 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 CNMDO75829 334 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 GCLCP48506 637 aaPredicted RBP20.71■□□□□ 0.91
CDK4-210ENST00000551888 CHMP4CQ96CF2 233 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 TMEM47Q9BQJ4 181 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 CNNM2Q9H8M5 875 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 RBPJLQ9UBG7 517 aa20.71■□□□□ 0.91
CDK4-210ENST00000551888 HTTP42858 3142 aa20.7■□□□□ 0.9
CDK4-210ENST00000551888 NT5C2P49902 561 aa20.7■□□□□ 0.9
CDK4-210ENST00000551888 SLFN13Q68D06 897 aa20.7■□□□□ 0.9
CDK4-210ENST00000551888 CTU1Q7Z7A3 348 aaKnown RBP20.7■□□□□ 0.9
CDK4-210ENST00000551888 MB21D2Q8IYB1 491 aaPredicted RBP20.7■□□□□ 0.9
CDK4-210ENST00000551888 MORF4L1Q9UBU8 362 aa20.7■□□□□ 0.9
CDK4-210ENST00000551888 TNKSO95271 1327 aa20.7■□□□□ 0.9
CDK4-210ENST00000551888 FLOT1O75955 427 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 ANTXR2P58335 489 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 COG2Q14746 738 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 PPP4R3BQ5MIZ7 849 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 LBX2Q6XYB7 198 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 OTOP1Q7RTM1 612 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 RASEFQ8IZ41 740 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 ENAHQ8N8S7 591 aaPredicted RBP20.69■□□□□ 0.9
CDK4-210ENST00000551888 ATG4CQ96DT6 458 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 ZSCAN10Q96SZ4 725 aaPredicted RBP20.69■□□□□ 0.9
CDK4-210ENST00000551888 BTBD7Q9P203 1132 aa20.69■□□□□ 0.9
CDK4-210ENST00000551888 TOP1P11387 765 aaKnown RBP20.68■□□□□ 0.9
CDK4-210ENST00000551888 DSG3P32926 999 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms