RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TTC14Q96N46 770 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 KIF2CQ99661 725 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 LRRC2Q9BYS8 371 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 ZSWIM6Q9HCJ5 1215 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 TNKSO95271 1327 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 BTBD19C9JJ37 291 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 CETPP11597 493 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 ANAPC15P60006 121 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 TREML2Q5T2D2 321 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 DHX32Q7L7V1 743 aaKnown RBP15.35■□□□□ 0.05
RAB5C-206ENST00000550406 RASGRP2Q7LDG7 609 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 IQCA1Q86XH1 822 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 LRRC47Q8N1G4 583 aaKnown RBP15.35■□□□□ 0.05
RAB5C-206ENST00000550406 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 C22orf23Q9BZE7 217 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 TM6SF1Q9BZW5 370 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 STX8Q9UNK0 236 aa15.35■□□□□ 0.05
RAB5C-206ENST00000550406 F5H6K3 240 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
RAB5C-206ENST00000550406 TOP1P11387 765 aaKnown RBP15.34■□□□□ 0.05
RAB5C-206ENST00000550406 RPS6KB1P23443 525 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 RBM25P49756 843 aaKnown RBP15.34■□□□□ 0.05
RAB5C-206ENST00000550406 KLRC3Q07444 240 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 GADL1Q6ZQY3 521 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 IFNL1Q8IU54 200 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 PROCA1Q8NCQ7 364 aaPredicted RBP15.34■□□□□ 0.05
RAB5C-206ENST00000550406 FEZ1Q99689 392 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 MTA3Q9BTC8 594 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 LY9Q9HBG7 655 aa15.34■□□□□ 0.05
RAB5C-206ENST00000550406 SH2B2O14492 632 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-206ENST00000550406 NDUFB10O96000 172 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
RAB5C-206ENST00000550406 USP14P54578 494 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 INHBEP58166 350 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 CCDC178Q5BJE1 867 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 RUFY3Q7L099 469 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 FASTKD5Q7L8L6 764 aaKnown RBP15.33■□□□□ 0.04
RAB5C-206ENST00000550406 SPICE1Q8N0Z3 855 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 UBAC1Q9BSL1 405 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 SYNPO2Q9UMS6 1093 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 WDR19Q8NEZ3 1342 aa15.33■□□□□ 0.04
RAB5C-206ENST00000550406 COL11A1P12107 1806 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-206ENST00000550406 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
RAB5C-206ENST00000550406 VCAM1P19320 739 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 PSMA5P28066 241 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 SLFN13Q68D06 897 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 ANKRD23Q86SG2 305 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 GMCL1P1Q8NEA9 526 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 CHMP4CQ96CF2 233 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 TBC1D32Q96NH3 1257 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
RAB5C-206ENST00000550406 UPF3BQ9BZI7 483 aaKnown RBP15.32■□□□□ 0.04
RAB5C-206ENST00000550406 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 TMOD4Q9NZQ9 345 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
RAB5C-206ENST00000550406 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-206ENST00000550406 LIFRP42702 1097 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 SREBF2Q12772 1141 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 WTAPQ15007 396 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 IFIT1BQ5T764 474 aaKnown RBP15.31■□□□□ 0.04
RAB5C-206ENST00000550406 POTEEQ6S8J3 1075 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 Q6ZUG5 572 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-206ENST00000550406 FBXL16Q8N461 479 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 JMYQ8N9B5 988 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 LPAR1Q92633 364 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 AGXT2Q9BYV1 514 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 R3HDMLQ9H3Y0 253 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 RPAP3Q9H6T3 665 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-206ENST00000550406 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 CYP46A1Q9Y6A2 500 aa15.31■□□□□ 0.04
RAB5C-206ENST00000550406 PDHXO00330 501 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 WDR46O15213 610 aaKnown RBP15.3■□□□□ 0.04
RAB5C-206ENST00000550406 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 TOB2Q14106 344 aaPredicted RBP15.3■□□□□ 0.04
RAB5C-206ENST00000550406 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 RNF186Q9NXI6 227 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 MTMR7Q9Y216 660 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
RAB5C-206ENST00000550406 ERICH2A1L162 156 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 RAD21O60216 631 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 PDHBP11177 359 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms