RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 HAND2P61296 217 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 FAM47AQ5JRC9 791 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 LPAR1Q92633 364 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 VCPKMTQ9H867 229 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB5C-204ENST00000547517 MYPNQ86TC9 1320 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 LAMA4Q16363 1823 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
RAB5C-204ENST00000547517 HOXD10P28358 340 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 PRKCZQ05513 592 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
RAB5C-204ENST00000547517 CEP95Q96GE4 821 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 IL25Q9H293 177 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 INCENPQ9NQS7 918 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 TOMM22Q9NS69 142 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 MORF4L1Q9UBU8 362 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 SRRDQ9UH36 339 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 ANAPC4Q9UJX5 808 aa14.04□□□□□ -0.16
RAB5C-204ENST00000547517 IGKV6D-41A0A0C4DH26 115 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 SPDYE16A6NNV3 312 aaPredicted RBP14.03□□□□□ -0.16
RAB5C-204ENST00000547517 WDR46O15213 610 aaKnown RBP14.03□□□□□ -0.16
RAB5C-204ENST00000547517 SOX10P56693 466 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 TFAP4Q01664 338 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 SLC9C1Q4G0N8 1177 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 RRP12Q5JTH9 1297 aaKnown RBP14.03□□□□□ -0.16
RAB5C-204ENST00000547517 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
RAB5C-204ENST00000547517 TBC1D10CQ8IV04 446 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 LRRC47Q8N1G4 583 aaKnown RBP14.03□□□□□ -0.16
RAB5C-204ENST00000547517 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 RAD50Q92878 1312 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 CENPFP49454 3210 aa14.03□□□□□ -0.16
RAB5C-204ENST00000547517 A0A0G2JMZ2 1700 aa14.02□□□□□ -0.16
RAB5C-204ENST00000547517 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.17
RAB5C-204ENST00000547517 FLOT1O75955 427 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 CHMLP26374 656 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 PRMT2P55345 433 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 ERVK-9P63128 1117 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 ERVK-24P63145 666 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 POTEEQ6S8J3 1075 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 RAET1EQ8TD07 263 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 SH3TC2Q8TF17 1288 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 MTMR4Q9NYA4 1195 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 NYAP2Q9P242 653 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 RBPJLQ9UBG7 517 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 GABRQQ9UN88 632 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
RAB5C-204ENST00000547517 ORC4O43929 436 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 CNMDO75829 334 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 TTLL1O95922 423 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 CCAR1Q8IX12 1150 aaKnown RBP14.01□□□□□ -0.17
RAB5C-204ENST00000547517 RUFY2Q8WXA3 655 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 COA7Q96BR5 231 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-204ENST00000547517 DSCC1Q9BVC3 393 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 NBPF3Q9H094 633 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 RABGAP1Q9Y3P9 1069 aa14.01□□□□□ -0.17
RAB5C-204ENST00000547517 NEDD4P46934 1319 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 PARP14Q460N5 1801 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 ZNF213O14771 459 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 NMT2O60551 498 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 NDUFB10O96000 172 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 MYCP01106 439 aaPredicted RBP14□□□□□ -0.17
RAB5C-204ENST00000547517 FLT3LGP49771 235 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 COG2Q14746 738 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 LBX2Q6XYB7 198 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 STAG1Q8WVM7 1258 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 ARMC5Q96C12 935 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 ATG4CQ96DT6 458 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 PORCNQ9H237 461 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
RAB5C-204ENST00000547517 FBXO28Q9NVF7 368 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 BTBD7Q9P203 1132 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 STX8Q9UNK0 236 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 RLFQ13129 1914 aa14□□□□□ -0.17
RAB5C-204ENST00000547517 F5H6K3 240 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 FGRP09769 529 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 KLRC3Q07444 240 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 IMMTQ16891 758 aaKnown RBP13.99□□□□□ -0.17
RAB5C-204ENST00000547517 Q3C1V9 767 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 WDR78Q5VTH9 848 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 MFSD6Q6ZSS7 791 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 ZNF333Q96JL9 665 aa13.99□□□□□ -0.17
RAB5C-204ENST00000547517 RNF41Q9H4P4 317 aaPredicted RBP13.99□□□□□ -0.17
RAB5C-204ENST00000547517 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
RAB5C-204ENST00000547517 PCP11498 1178 aaKnown RBP13.98□□□□□ -0.17
RAB5C-204ENST00000547517 MAPK4P31152 587 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 GRK4P32298 578 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 DSG3P32926 999 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms