RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 EEF2P13639 858 aaKnown RBP16.01■□□□□ 0.15
SCARB1-209ENST00000545305 GUCY1A2P33402 732 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 RRP1BQ14684 758 aaKnown RBP16.01■□□□□ 0.15
SCARB1-209ENST00000545305 IFFO2Q5TF58 517 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 KRT26Q7Z3Y9 468 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 CTNND1O60716 968 aaKnown RBP16■□□□□ 0.15
SCARB1-209ENST00000545305 PPFIA3O75145 1194 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 NTRK3Q16288 839 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 SHROOM1Q2M3G4 852 aaPredicted RBP16■□□□□ 0.15
SCARB1-209ENST00000545305 ASPRV1Q53RT3 343 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 PHKBQ93100 1093 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 MKL1Q969V6 931 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 LZTS2Q9BRK4 669 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
SCARB1-209ENST00000545305 SH2D4AQ9H788 454 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
SCARB1-209ENST00000545305 ATAD5Q96QE3 1844 aa16■□□□□ 0.15
SCARB1-209ENST00000545305 PHF20L1A8MW92 1017 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 ADM5C9JUS6 153 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 PLEKHA8P1O95397 391 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 BRD1O95696 1058 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 ZSCAN22P10073 491 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-209ENST00000545305 NF2P35240 595 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 JAG1P78504 1218 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 PKP1Q13835 747 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 PRAMEF18Q5VWM3 479 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 CCDC82Q8N4S0 544 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
SCARB1-209ENST00000545305 DOCK1Q14185 1865 aa15.99■□□□□ 0.15
SCARB1-209ENST00000545305 CNTNAP5Q8WYK1 1306 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 RAD21O60216 631 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 DEXIO95424 95 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 PDHBP11177 359 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 FDPSP14324 419 aaKnown RBP15.98■□□□□ 0.15
SCARB1-209ENST00000545305 FOSBP53539 338 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 TRIM29Q14134 588 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 CCDC96Q2M329 555 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 GPATCH4Q5T3I0 446 aaKnown RBP15.98■□□□□ 0.15
SCARB1-209ENST00000545305 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
SCARB1-209ENST00000545305 CMTR1Q8N1G2 835 aaKnown RBP15.98■□□□□ 0.15
SCARB1-209ENST00000545305 DCAF4Q8WV16 495 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
SCARB1-209ENST00000545305 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 WRNIP1Q96S55 665 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 ALG1Q9BT22 464 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 MAD2L2Q9UI95 211 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 MTMR6Q9Y217 621 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
SCARB1-209ENST00000545305 POLR2AP24928 1970 aaKnown RBP15.98■□□□□ 0.15
SCARB1-209ENST00000545305 SSC5DA1L4H1 1573 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 PALM3A6NDB9 673 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-209ENST00000545305 USP17L5A8MUK1 530 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 POTECB2RU33 542 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
SCARB1-209ENST00000545305 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-209ENST00000545305 SLFN13Q68D06 897 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 USP17L2Q6R6M4 530 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 SCYL3Q8IZE3 742 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 SRBD1Q8N5C6 995 aaKnown RBP15.97■□□□□ 0.15
SCARB1-209ENST00000545305 GMCL1P1Q8NEA9 526 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 TNPO1Q92973 898 aaKnown RBP15.97■□□□□ 0.15
SCARB1-209ENST00000545305 GBP4Q96PP9 640 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 PICK1Q9NRD5 415 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 ZNF112Q9UJU3 913 aa15.97■□□□□ 0.15
SCARB1-209ENST00000545305 FRMPD2Q68DX3 1309 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-209ENST00000545305 MYH6P13533 1939 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 F13A1P00488 732 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 GOLGA8HP0CJ92 632 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 XBP1P17861 261 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 ZNF543Q08ER8 600 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 FUT2Q10981 343 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 CDC37L1Q7L3B6 337 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 STAG2Q8N3U4 1231 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 RGS22Q8NE09 1264 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 CDCA5Q96FF9 252 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 FEZ1Q99689 392 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 ZDHHC9Q9Y397 364 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 ATP6V1DQ9Y5K8 247 aa15.96■□□□□ 0.15
SCARB1-209ENST00000545305 PPP1R12BO60237 982 aaPredicted RBP15.95■□□□□ 0.14
SCARB1-209ENST00000545305 SMARCA1P28370 1054 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 INPP5BP32019 993 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 SLC1A4P43007 532 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 RASGRP2Q7LDG7 609 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 SIAH1Q8IUQ4 282 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 GMCL1Q96IK5 515 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 AS3MTQ9HBK9 375 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 GPCPD1Q9NPB8 672 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 TMX2Q9Y320 296 aa15.95■□□□□ 0.14
SCARB1-209ENST00000545305 V9GY48 417 aaPredicted RBP15.95■□□□□ 0.14
SCARB1-209ENST00000545305 F5H6K3 240 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 NDUFB10O96000 172 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 IREB2P48200 963 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms