RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 KRT31Q15323 416 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 FAM47AQ5JRC9 791 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 SOGA3Q5TF21 947 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 PALLDQ8WX93 1383 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 KRT18P05783 430 aaKnown RBP14.55□□□□□ -0.08
MSH6-210ENST00000540021 IFNAR1P17181 557 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 CXCR5P32302 372 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 KCTD16Q68DU8 428 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 NOA1Q8NC60 698 aaKnown RBP14.55□□□□□ -0.08
MSH6-210ENST00000540021 BCAS4Q8TDM0 211 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 PPM1EQ8WY54 764 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 PANX2Q96RD6 677 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 LCMT1Q9UIC8 334 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 GDAQ9Y2T3 454 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 SAMM50Q9Y512 469 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 ATP2B2Q01814 1243 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 PUM3Q15397 648 aaKnown RBP14.55□□□□□ -0.08
MSH6-210ENST00000540021 NOC4LQ9BVI4 516 aaKnown RBP14.55□□□□□ -0.08
MSH6-210ENST00000540021 LY9Q9HBG7 655 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 POLD4Q9HCU8 107 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 FAM207AQ9NSI2 230 aaPredicted RBP14.55□□□□□ -0.08
MSH6-210ENST00000540021 ZRANB2O95218 330 aaKnown RBP eCLIP14.55□□□□□ -0.08
MSH6-210ENST00000540021 USP8P40818 1118 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 PTPROQ16827 1216 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 TYW1BQ6NUM6 668 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 DTHD1Q6ZMT9 781 aa14.55□□□□□ -0.08
MSH6-210ENST00000540021 CIAO1O76071 339 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 C2orf54Q08AI8 447 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 TAF4BQ92750 862 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 UIMC1Q96RL1 719 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 KAT14Q9H8E8 782 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 SRPRBQ9Y5M8 271 aaKnown RBP14.54□□□□□ -0.08
MSH6-210ENST00000540021 TUBBP07437 444 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 HPDP32754 393 aaPredicted RBP14.54□□□□□ -0.08
MSH6-210ENST00000540021 TUBB4BP68371 445 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 CAVIN4Q5BKX8 364 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 LCORLQ8N3X6 602 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 FOXP1Q9H334 677 aaPredicted RBP14.54□□□□□ -0.08
MSH6-210ENST00000540021 MKRN1Q9UHC7 482 aaKnown RBP14.54□□□□□ -0.08
MSH6-210ENST00000540021 TRIM49BA6NDI0 452 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 GNGT1P63211 74 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 PTPAQ15257 358 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 SRLQ86TD4 932 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 OTUD6BQ8N6M0 293 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 CHP1Q99653 195 aa14.54□□□□□ -0.08
MSH6-210ENST00000540021 B4DLN1 442 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 EIF3CLB5ME19 914 aaKnown RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 PDE8BO95263 885 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 PPARAQ07869 468 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 TUBB2AQ13885 445 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 DZIP3Q86Y13 1208 aaKnown RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 ANKRD18AQ8IVF6 992 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 CRACR2BQ8N4Y2 399 aaPredicted RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 SECISBP2LQ93073 1101 aaKnown RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 EIF3CQ99613 913 aaKnown RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 TUBB2BQ9BVA1 445 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 TECPR2O15040 1411 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 SALL1Q9NSC2 1324 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 PXDNQ92626 1479 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 NOP2P46087 812 aaKnown RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 SLC7A5Q01650 507 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 PDE4DQ08499 809 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 UBE3CQ15386 1083 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 STRBPQ96SI9 672 aaKnown RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 TMCO5BA8MYB1 307 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 LPIN2Q92539 896 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 CCDC51Q96ER9 411 aa14.53□□□□□ -0.08
MSH6-210ENST00000540021 FBXO2Q9UK22 296 aaPredicted RBP14.53□□□□□ -0.08
MSH6-210ENST00000540021 RTL9Q8NET4 1388 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 ERLIN2O94905 339 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 NDUFA10O95299 355 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 CCDC40Q4G0X9 1142 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.081e-10■■□□□ 11.7
MSH6-210ENST00000540021 GSDMAQ96QA5 445 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 AGXT2Q9BYV1 514 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 MED4Q9NPJ6 270 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 INTS13Q9NVM9 706 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 RFX7Q2KHR2 1363 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 CUL4BQ13620 913 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.08
MSH6-210ENST00000540021 C2CD5Q86YS7 1000 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 ABHD10Q9NUJ1 306 aa14.52□□□□□ -0.08
MSH6-210ENST00000540021 OPA1O60313 960 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 BMP6P22004 513 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 INPP5BP32019 993 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 CTSWP56202 376 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 TRIM14Q14142 442 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 LETM2Q2VYF4 491 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 FOXR1Q6PIV2 292 aa14.52□□□□□ -0.09
MSH6-210ENST00000540021 LUC7LQ9NQ29 371 aaKnown RBP14.52□□□□□ -0.09
MSH6-210ENST00000540021 RPN1P04843 607 aaKnown RBP14.51□□□□□ -0.09
MSH6-210ENST00000540021 GNAT2P19087 354 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 GUCY2FP51841 1108 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 NR1I3Q14994 352 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 C8orf74Q6P047 294 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms