RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 BADQ92934 168 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 MROH8Q9H579 483 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 AFG3L2Q9Y4W6 797 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 UTRNP46939 3433 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 AACSQ86V21 672 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 SPICE1Q8N0Z3 855 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 CIAO1O76071 339 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 CLTBP09497 229 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 AKR1A1P14550 325 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 CACNB2Q08289 660 aaPredicted RBP9.04□□□□□ -0.96
GNE-205ENST00000539815 TREML2Q5T2D2 321 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 PSRC1Q6PGN9 363 aaPredicted RBP9.04□□□□□ -0.96
GNE-205ENST00000539815 CCDC17Q96LX7 622 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 CCDC8Q9H0W5 538 aaPredicted RBP9.04□□□□□ -0.96
GNE-205ENST00000539815 PIEZO1Q92508 2521 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 COL3A1P02461 1466 aaPredicted RBP9.04□□□□□ -0.96
GNE-205ENST00000539815 MRPS5P82675 430 aaKnown RBP9.03□□□□□ -0.96
GNE-205ENST00000539815 RASGRF1Q13972 1273 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 NSMFQ6X4W1 530 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 SSH1Q8WYL5 1049 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 COL9A1P20849 921 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 STAT3P40763 770 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 UHRF1Q96T88 793 aaPredicted RBP9.03□□□□□ -0.96
GNE-205ENST00000539815 CDX2Q99626 313 aaPredicted RBP9.03□□□□□ -0.96
GNE-205ENST00000539815 HOMER2Q9NSB8 354 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 FBXO40Q9UH90 709 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 COL4A5P29400 1685 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 FGBP02675 491 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 BMP8BP34820 402 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 TRIB2Q92519 343 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 NOB1Q9ULX3 412 aaKnown RBP9.03□□□□□ -0.96
GNE-205ENST00000539815 NRXN2Q9P2S2 1712 aa9.03□□□□□ -0.96
GNE-205ENST00000539815 DNM1LO00429 736 aa9.02□□□□□ -0.96
GNE-205ENST00000539815 ADORA2AP29274 412 aa9.02□□□□□ -0.96
GNE-205ENST00000539815 ADORA1P30542 326 aa9.02□□□□□ -0.96
GNE-205ENST00000539815 PPP2R2DQ66LE6 453 aa9.02□□□□□ -0.96
GNE-205ENST00000539815 TICAM2Q86XR7 235 aa9.02□□□□□ -0.96
GNE-205ENST00000539815 GDF15Q99988 308 aa9.02□□□□□ -0.96
GNE-205ENST00000539815 SEPT4O43236 478 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 ERCC3P19447 782 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 TRIM60Q495X7 471 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 SLC9C2Q5TAH2 1124 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 PTPREP23469 700 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 COL25A1Q9BXS0 654 aaPredicted RBP9.02□□□□□ -0.97
GNE-205ENST00000539815 ZNF576Q9H609 170 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 NUP98P52948 1817 aa9.02□□□□□ -0.97
GNE-205ENST00000539815 PGK1P00558 417 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 SUPT20HL2P0C7V6 817 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 CCND3P30281 292 aaPredicted RBP9.01□□□□□ -0.97
GNE-205ENST00000539815 GRIK5Q16478 980 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 WDR18Q9BV38 432 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 GPR75-ASB3A0A0A6YYF3 556 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 SH3RF3Q8TEJ3 882 aaPredicted RBP9.01□□□□□ -0.97
GNE-205ENST00000539815 KIFC2Q96AC6 838 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 RPAP1Q9BWH6 1393 aaPredicted RBP9.01□□□□□ -0.97
GNE-205ENST00000539815 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 ALDH1L2Q3SY69 923 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 TMEM179Q6ZVK1 233 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 ZFPM1Q8IX07 1006 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 ANP32BQ92688 251 aaKnown RBP9.01□□□□□ -0.97
GNE-205ENST00000539815 PRDM12Q9H4Q4 367 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 PAK6Q9NQU5 681 aaPredicted RBP9.01□□□□□ -0.97
GNE-205ENST00000539815 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
GNE-205ENST00000539815 UTYO14607 1347 aa9□□□□□ -0.97
GNE-205ENST00000539815 TRIM32Q13049 653 aa9□□□□□ -0.97
GNE-205ENST00000539815 SHHQ15465 462 aa9□□□□□ -0.97
GNE-205ENST00000539815 SPATC1LQ9H0A9 340 aa9□□□□□ -0.97
GNE-205ENST00000539815 HMG20BQ9P0W2 317 aa9□□□□□ -0.97
GNE-205ENST00000539815 TCEAL9Q9UHQ7 104 aa9□□□□□ -0.97
GNE-205ENST00000539815 OGDHLQ9ULD0 1010 aa9□□□□□ -0.97
GNE-205ENST00000539815 TBC1D12O60347 775 aa9□□□□□ -0.97
GNE-205ENST00000539815 CT47B1P0C2W7 299 aaPredicted RBP9□□□□□ -0.97
GNE-205ENST00000539815 DNAJB2P25686 324 aa9□□□□□ -0.97
GNE-205ENST00000539815 SEPT2Q15019 361 aa9□□□□□ -0.97
GNE-205ENST00000539815 CHURC1Q8WUH1 139 aa9□□□□□ -0.97
GNE-205ENST00000539815 PORCNQ9H237 461 aa9□□□□□ -0.97
GNE-205ENST00000539815 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
GNE-205ENST00000539815 STX8Q9UNK0 236 aa9□□□□□ -0.97
GNE-205ENST00000539815 KIAA1551Q9HCM1 1747 aa9□□□□□ -0.97
GNE-205ENST00000539815 GOLGB1Q14789 3259 aaKnown RBP9□□□□□ -0.97
GNE-205ENST00000539815 CA8P35219 290 aa9□□□□□ -0.97
GNE-205ENST00000539815 HNRNPUQ00839 825 aaKnown RBP eCLIP9□□□□□ -0.97
GNE-205ENST00000539815 PDE4BQ07343 736 aa9□□□□□ -0.97
GNE-205ENST00000539815 CCL14Q16627 93 aa9□□□□□ -0.97
GNE-205ENST00000539815 SHCBP1Q8NEM2 672 aa9□□□□□ -0.97
GNE-205ENST00000539815 ARID3AQ99856 593 aa9□□□□□ -0.97
GNE-205ENST00000539815 USP44Q9H0E7 712 aa9□□□□□ -0.97
GNE-205ENST00000539815 SWAP70Q9UH65 585 aa9□□□□□ -0.97
GNE-205ENST00000539815 LRRC26Q2I0M4 334 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 RRP12Q5JTH9 1297 aaKnown RBP8.99□□□□□ -0.97
GNE-205ENST00000539815 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 KANSL2Q9H9L4 492 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 MORF4L1Q9UBU8 362 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms